Gene detail

Detailed information of ENSSJYP00000006712.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_020615512.1, AP-4 complex subunit epsilon-1-like isoform X3 [Orbicella faveolata]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000007022

ATGGAAAAACTTTGCTCCTTGTTCAAAAGACATGTCAACGATGAATTAACTAAACCCTGGATAGTTACTGCTGTCACGAAAATCGTTGCTCAGATTGGGTATTTACCAGatgaaacaagaaataaaattgaagagCAGTTGAACATTTCCAATAACATGGAAATGAAACAGcgTTGTGCAGAGCTTCTTTGCTTGTTAGatgtttttcaatcattgGATGATGTTTTGCCTGTTGATGCAAGTTGTGAAGATGTAGAGGTTGATCCAACGTTATCATTCCTTGATGAATTCGTTGCCGACGCACTGGCAAGAGGGGCAGCACCCTACAAACCAAAACAACAAATGCAAgatgaagatcaaaaaacATCAGATAAAGATTTGAAGAAGCTGAATATAACTCCATACCCAACTTATGAATCTCCAAAAGAGCCTTTAACGTTTCCACCAATCCGGCAAACAGTTGTAGAAAGTCAACCAGTGGGAATAAGTTCATCTGTTGGTGGCACAATTCTTCCAACGAGTTCAGATACCCCTGCCAGGGTGAATACGCAGAAACCAGTAAAGAAAGTATGGGACTTATCTGGTTACATTGGAGACAAGCAAAGATCCGGCTCGCTGGACCATTTTTCAGATTCATCTTCAACCACATCAGGTGCTGAAAGTAGTTCATTATCAAGTGGAAGGATCATCAAAAATGAGGAAGAAACTCATTTAAAACCAGCATCGAAAGTACCTGAGAAGGACGCAGAAAAAGAGAAACTGGCTGAGCAGTTGTTTGCACAAAGTCCGCAAAATGTTAACGTCCGACCTGAAAAGGCTGGGTTTTCTGCTAGGcgaaaatttgataaaggaTCAAAAACAACTAAGCAGAATAAAGAGCAGGGCAAATTGTCAGACCAGAGGCAAACTTCAACATTACTGTTAGATTTAGATGATTCTGGGGTCGGTGAGAACTCCGGACCAGAACACGCCGAAGTTGATAAAACGGAGGAAAAACCTGAAGCGGAGAATGAGAAGTCTGTTGATTATCAAACGAACGAAGCGTTGTTTGAAGGGCTGGTTATAAGCAATGAAACTGAATCGAACCTCTTATCTGACCAAAGAAATGATTCCGGGGAAGAAAACTCAGCTGAGAAACAAGCATCATCGGAAGATTTACTGATAAGTGATTTTGATGGTATGAATTTATCACCAGCTGAAATCGAACCAAGCAATAACAAGCCACAAAATGGAGAGGATCTTTTGGGTACATCGATAGAAAATGATGCCACTTTGGTGACAGAAAATCTCCTTGATTCTTTAAATCCTTGTATCGATGACGTAGCCACGCAAAAAATAGCGGAACGGATTGTTCCTGAATTGCCTGAAGAGTTGAAAGTCTACACAAGTTTAGGAATCGAAGTTATCAGTGAagatatgaatatgaaattatcCATCCAGAAAGTTTTTACACCAGAGATTCTAACGGTTGTATTGTACTTGATTAACCAAAACACCAGTTTGTTGAAAGATGTTTATCTCAGTCTACAGCCACCGTCAAACTTTACTTCAAAACTAGACGCCTCCTCAGAGACAAGTAAATATATTGCGCAAATTGATGGATATGGATTGAAACGACAAGTTCTGACTATGAAGTTTAATGCTCCTTCGCTTCATATGGTGATCGGAGGTTATATATCCTATAAAGATAACAGCAATACACAGAAAAGGCTCTTCATCAACTGTCCTGTGGtggtttttgattttgttaggCCGTTGACAATCGACACACCAACTTATGGTTCGAACTGGACGAATATGTCATATGAAAAGAAGCAATTGATCAACTTGCAAAATGCATCAacaattgaagaaatttgccagaatatcaaagaaaaattgaattttcataTCGTACAAATAATCGGAAGTGAAGCAATATCCGCTGGTATTATCGACAACAATCAACGTTGCTTACTCCATTTTAAGTGTCTACCATCATCAATCGAATTGAGACTTAAAACTCCAAGTACGTTGTTAAATGAATCGATCATTAATGGTATCACAAAACTGTTCTTGTAA

Transcript

ENSSJYT00000007022

GTCATTGGAGAGTATTCATATCTTGCTACTCATTGCGATTCTGAGGACGTCATGGAAAAACTTTGCTCCTTGTTCAAAAGACATGTCAACGATGAATTAACTAAACCCTGGATAGTTACTGCTGTCACGAAAATCGTTGCTCAGATTGGGTATTTACCAGatgaaacaagaaataaaattgaagagCAGTTGAACATTTCCAATAACATGGAAATGAAACAGcgTTGTGCAGAGCTTCTTTGCTTGTTAGatgtttttcaatcattgGATGATGTTTTGCCTGTTGATGCAAGTTGTGAAGATGTAGAGGTTGATCCAACGTTATCATTCCTTGATGAATTCGTTGCCGACGCACTGGCAAGAGGGGCAGCACCCTACAAACCAAAACAACAAATGCAAgatgaagatcaaaaaacATCAGATAAAGATTTGAAGAAGCTGAATATAACTCCATACCCAACTTATGAATCTCCAAAAGAGCCTTTAACGTTTCCACCAATCCGGCAAACAGTTGTAGAAAGTCAACCAGTGGGAATAAGTTCATCTGTTGGTGGCACAATTCTTCCAACGAGTTCAGATACCCCTGCCAGGGTGAATACGCAGAAACCAGTAAAGAAAGTATGGGACTTATCTGGTTACATTGGAGACAAGCAAAGATCCGGCTCGCTGGACCATTTTTCAGATTCATCTTCAACCACATCAGGTGCTGAAAGTAGTTCATTATCAAGTGGAAGGATCATCAAAAATGAGGAAGAAACTCATTTAAAACCAGCATCGAAAGTACCTGAGAAGGACGCAGAAAAAGAGAAACTGGCTGAGCAGTTGTTTGCACAAAGTCCGCAAAATGTTAACGTCCGACCTGAAAAGGCTGGGTTTTCTGCTAGGcgaaaatttgataaaggaTCAAAAACAACTAAGCAGAATAAAGAGCAGGGCAAATTGTCAGACCAGAGGCAAACTTCAACATTACTGTTAGATTTAGATGATTCTGGGGTCGGTGAGAACTCCGGACCAGAACACGCCGAAGTTGATAAAACGGAGGAAAAACCTGAAGCGGAGAATGAGAAGTCTGTTGATTATCAAACGAACGAAGCGTTGTTTGAAGGGCTGGTTATAAGCAATGAAACTGAATCGAACCTCTTATCTGACCAAAGAAATGATTCCGGGGAAGAAAACTCAGCTGAGAAACAAGCATCATCGGAAGATTTACTGATAAGTGATTTTGATGGTATGAATTTATCACCAGCTGAAATCGAACCAAGCAATAACAAGCCACAAAATGGAGAGGATCTTTTGGGTACATCGATAGAAAATGATGCCACTTTGGTGACAGAAAATCTCCTTGATTCTTTAAATCCTTGTATCGATGACGTAGCCACGCAAAAAATAGCGGAACGGATTGTTCCTGAATTGCCTGAAGAGTTGAAAGTCTACACAAGTTTAGGAATCGAAGTTATCAGTGAagatatgaatatgaaattatcCATCCAGAAAGTTTTTACACCAGAGATTCTAACGGTTGTATTGTACTTGATTAACCAAAACACCAGTTTGTTGAAAGATGTTTATCTCAGTCTACAGCCACCGTCAAACTTTACTTCAAAACTAGACGCCTCCTCAGAGACAAGTAAATATATTGCGCAAATTGATGGATATGGATTGAAACGACAAGTTCTGACTATGAAGTTTAATGCTCCTTCGCTTCATATGGTGATCGGAGGTTATATATCCTATAAAGATAACAGCAATACACAGAAAAGGCTCTTCATCAACTGTCCTGTGGtggtttttgattttgttaggCCGTTGACAATCGACACACCAACTTATGGTTCGAACTGGACGAATATGTCATATGAAAAGAAGCAATTGATCAACTTGCAAAATGCATCAacaattgaagaaatttgccagaatatcaaagaaaaattgaattttcataTCGTACAAATAATCGGAAGTGAAGCAATATCCGCTGGTATTATCGACAACAATCAACGTTGCTTACTCCATTTTAAGTGTCTACCATCATCAATCGAATTGAGACTTAAAACTCCAAGTACGTTGTTAAATGAATCGATCATTAATGGTATCACAAAACTGTTCTTGTAATTATCATTCAAACCGCTATTCCGATTTAGTCAATCCTTTTTTAGATTGAGAGAATCTAATTTTTGATTGACCGAATCCCTTCAAATAATGCGCCAgttatttttgcttaaattcTGCATAAAAATCCGGATAaaatccaaatttaaattctaTCAAGATATCGATTTATCCACTCTCACCCTTTCATACTTCAACTGGCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8L7A9	AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002707 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14807 all species →	AP4E_app_platf	Adaptin AP4 complex epsilon appendage platform	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050840 all species →	Family	Adaptor Complexes Large Subunit	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR028269 all species →	Domain	AP-4 complex subunit epsilon-1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22780 all species →	ADAPTIN, ALPHA/GAMMA/EPSILON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030124 all species →	Cellular Component	AP-4 adaptor complex	Interproscan
GO:0140312 all species →	Molecular Function	cargo adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000006712.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.