Genomic Location: not available for this species
NR annotation: XP_019753083.1, PREDICTED: tRNA-splicing ligase RtcB homolog isoform X1 [Hippocampus comes]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000007115 |
| Transcript |
| ENSSJYT00000007115 |
| Protein |
| ENSSJYP00000006799.1 |
| UniProt accession | Description |
|---|---|
| Q561P3 | RNA-splicing ligase RtcB homolog OS=Xenopus tropicalis OX=8364 GN=rtcb PE=2 SV=1 |
| Q6NZS4 | RNA-splicing ligase RtcB homolog OS=Danio rerio OX=7955 GN=rtcb PE=2 SV=1 |
| A7RKF6 | RNA-splicing ligase RtcB homolog OS=Nematostella vectensis OX=45351 GN=v1g198406 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003319 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01139 all species → | RtcB | tRNA-splicing ligase RtcB | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001233 all species → | Family | RNA-splicing ligase, RtcB | Interproscan |
| IPR036025 all species → | Homologous_superfamily | tRNA-splicing ligase RtcB-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11118 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0008452 all species → | Molecular Function | RNA ligase activity | Interproscan |
| GO:0000971 all species → | Biological Process | obsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate | Interproscan |
| GO:0003972 all species → | Molecular Function | RNA ligase (ATP) activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0072669 all species → | Cellular Component | tRNA-splicing ligase complex | Interproscan |
ENSSJYP00000006799.1.
