Gene detail

Detailed information of ENSSJYP00000007442.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_046855813.1, ribokinase-like isoform X1 [Xenia sp. Carnegie-2017]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000007785

AGCAAAGATTTGTTTTGACATGCAACGAATTATcgtgaaaaaaacatagagAAGGTTAAGCCAAAGACTTAACAAGGTCTGTCAAGGTATAAAGAATGTTAAATGTGAATTAAAGGTATCGTTTGAACTGGCTTTTAAGGGTCCATGGCGGCGTGTCACAAGTTTAAGCGTGACATATGCTAGCTGGAATTTTTAGGCCCATCTCAGTCTCACCGAAGGCGAATCACATGATGATGGCTGCTGCCATGTTTTTGAGGACTGGAAGGAAAAGTTTTAATGGCGCGAATAGAGTTGGTTTACAGCTAAGATGGTCCTCAACTGTGgaagataaaagaaatgGTGCAAAGCTTGTTCTTGGCTGTGGCAGCAATGTAGTGgaccaatttttcaaagtgcAAGCTCTACCAAAAGTTGGAGAGAAAGGGTTTTTCCAAAGCCCAACCCACATCAAAGAGAAGAGTATTGTTGGAGGAGTAACATTGAATCATTTGTCATGGGCATCACTTCTTGGTGTTCCAACTGGATTGTTGGCTTTGCAAGGTGCTGATGTTCCTGGTCGAttgataagaaacaaaatgaatcagctaaatattAGCAAAGACTTCATTCAAGTCAGCGATACGTACACAACTGCTCAGTCCTATGTTTTCATACAACAAGATGGTGAAAGATCTATAATAATGGCTTCTGGGGCAACAAGCATCATTAAGAAACAAACTGTGGAAGAATTTTTTGATGAAGCTGtgcgcaaaaatgctttgatgaTAACAACAGAAATTTCACAAGTACCGTTATCGGGTGTGATTGCCCtgttaaaaattgcaaaAGATCTAAACATCCCAAGTGTTGTTGACCTTGATGTTTCACCGTCTGTTGCCATAAAAGAAGCTGGACTAGGAACATTGGAGGAACTGAAAAAgTGCATGATGATGGCAGACATCTTGAAACCAGCCAAACATGCTGCAGCTGAGATGCTTGGAATATTAAAGCCAGAGTTAGAAAAtGTGAAACTGAGTGGAAGGgatgttgcaaaatatttaagaGAAAGTTGTGACTCTAAACTGCTTGCAATGACCAACGGAATCGAATCATCCGTGCTGACCAGCAAAAATCATACAGTAGAAGTTCCCACAGAAAGGCTGAAAAATGTTGTGGATGCAACTGGAGCAGGGGATGCCTTCCTTGGTGGACTCATCACAggtttgcattttcatggCTTACCACAAACTGAAGATGAAATGAgggaaattGGCATCTTGGCAAATAAAACTGGAGCCGCTTGCTGCAAAGTACTTGGTGGATTGCCGAATGACCAATCCAGgGAAGTGTTGAAAGAAGAAATCTTGCAATATAGAGGCGTTTTGGATGAGGGTGAGAGTGATGAATCAGCCAGTTACAATCCCTGCCCTGATTTTGAGAATAGTGTAAATGCGGATTTTGAAGCAGCACAAGGCGTTGTTGATTTGATGGATTTCCGGACTGTTGCTAAATTCATCGAATTCTTGGAAAATTGTAAAGGAAGTGTTCTGGTTTCCGGAATTGGAAAATCGGCAATTGTTGCACAGAGAATGGCAGCATCGTTGGCATCAACCGGAACACCTGCGCATTTCGTACACGCCACTGAGTGGGCGCATGGGGATTTAGgtaaaattagaaaagaagATGTTGTTGTGTTTTTCTCGCACAGTGGAAACACAGAAGAAGTGAACTACGCAGCCGAACTTGtccaaaaacatcaaattccTCTTCTTAGTATTGTAGGATCAAAAGactCTTCCCTGGCCCACATGTCCGATGCTATAATTGACTACGTTGTTGGGAAAGATCTACTTGAACCACTCGGAGGGGCACCAACTTCAAGTATTATCATGCAGgaaATGATGGTGAATGGAATTGTTTATGAATTAATTCGACGTAGAAATTTcacaaaagaacaatttttgtgGAATCATCCTGGTGGATCACTTGGCAGAAAATTATCCAAAAAGCTTGGATATAATATcagatttgtttaaaatacAGGATAATTTTATATGCATTCAATTAAATGTACATACATCGTTACAGGCgtcattttgtcatttaataTGTAAAATGATGACTGCACAATTGCcctgaaaatagaaattatgCCCTGCTAAAACAAGAATACAAGAATATGGTAGCATGGGGTGTGTACCACGACATTCCTGTTTTGAACGCCGCATGCATTTGCTATCGTGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q83JF4	Arabinose 5-phosphate isomerase KdsD OS=Shigella flexneri OX=623 GN=kdsD PE=3 SV=2
Q8X9J0	Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O157:H7 OX=83334 GN=kdsD PE=3 SV=1
Q8FD73	Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=kdsD PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010226 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01380 all species →	SIS	SIS domain	Domain	Interproscan
PF00294 all species →	PfkB	pfkB family carbohydrate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050986 all species →	Family	SIS family GutQ/KpsF subfamily isomerases	Interproscan
IPR001347 all species →	Domain	SIS domain	Interproscan
IPR035474 all species →	Domain	KpsF-like, SIS domain	Interproscan
IPR029056 all species →	Homologous_superfamily	Ribokinase-like	Interproscan
IPR018506 all species →	Binding_site	Cytochrome b5, heme-binding site	Interproscan
IPR046348 all species →	Homologous_superfamily	SIS domain superfamily	Interproscan
IPR011611 all species →	Domain	Carbohydrate kinase PfkB	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42745 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0097367 all species →	Molecular Function	carbohydrate derivative binding	Interproscan
GO:1901135 all species →	Biological Process	carbohydrate derivative metabolic process	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00820	glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)	EC:2.6.1.16	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.