Genomic Location: chr19:5617029...5621696
NR annotation: XP_020897980.1, regulator of nonsense transcripts 2 [Exaiptasia diaphana]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000008005 |
| Transcript |
| ENSSJYT00000008005 |
| Protein |
| ENSSJYP00000007654.1 |
| UniProt accession | Description |
|---|---|
| A2AT37 | Regulator of nonsense transcripts 2 OS=Mus musculus OX=10090 GN=Upf2 PE=1 SV=1 |
| Q9HAU5 | Regulator of nonsense transcripts 2 OS=Homo sapiens OX=9606 GN=UPF2 PE=1 SV=1 |
| F4IUX6 | Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana OX=3702 GN=UPF2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003459 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04050 all species → | Upf2 | Up-frameshift suppressor 2 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007193 all species → | Domain | Up-frameshift suppressor 2, C-terminal | Interproscan |
| IPR039762 all species → | Family | Nonsense-mediated mRNA decay protein Nmd2/UPF2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12839 all species → | NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000184 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005844 all species → | Cellular Component | obsolete polysome | Interproscan |
| GO:0035145 all species → | Cellular Component | exon-exon junction complex | Interproscan |
ENSSJYP00000007654.1.
