Gene detail

Detailed information of ENSSJYP00000008137.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047144926.1, sorbin and SH3 domain-containing protein 1 homolog isoform X1 [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000008492

atgtCCACATCAATGTTTGAAGTTTGTTTAAAGGGTGGTGCTCCATGGGGATTTCGTTTGACAGGCGGAAAAGAGTTCAGGACTTCGTTACGTATCTCAAAAGTAGAAGCAAATGGGAAAGCAGATGCTGCTGGTTTGTtagtaaatgatgaaataattgCTATTAATGGGAAAAATGTCCATAATGTATACCACACTGAAGCACTTGCATTTGTTAAGAAAGCTGGAAGTGAACTGTTATTGGTGCTAAATAGtaaGACATTCGTTTGTATTCAGACAAGGACTTCCGTTACATATTTCGGATGTTCAATGTTGGGCACTTGGATATGTCTCACAAAATGCTCCTCTGCTTTCTACCTGGTTCTCACCtctttattcaaatttattgcaGATGAAGACTATTATAAACGAACATCCTCGTTACCAAGGTCGCTAGGAAGGAGGCAAAACAAAGCGGGCGACCAGCATCGATCATCCACACTCCCTCGTAAGAAGCCCGTATGTCATTTTGCTGACcgtaattattttttcaaatcttatttatgtttgaaattttgttttagtgcCAGATCAAACCTGAGCCGTCTGTTAACTGCAGATGCTAAAAAGGGAGCTTTCCGACGATATGATGGTGCAACGTCACCTGGAGCGATCTCCCCGAAGGAAGGTCGatttttgtacggttttagcgcacctgcACTtcaggtgcgggactgttggtgcATCCTGCAAACTGGTGATTACCTTCTTGAACTGATGATTCAAATGCCCAATCAATCAGAATATCATTATcgtcattattattattattattattgttatcacaCCTTCATACCTTCAACACATGACATGAGCAAGAAACGAGAGGCTAGAGGAACAAATGATGAGAGGAGACAACAACGGCATTCGGTTCATTCAGCTTGGTATCGCGAGTTTCAAAAAGGTGGAGAGATTCCCTCTACTGGATTGGCTACAGGTAAATGTTATCCCTTGCTGGCTCTCTCTAGGCCTGCCTCAACCCAACAAGGCCcaaaaacaatatattttGGACTCCCATATCAAACGCCGGATCACCGATCACCTGATGACAGATTGAGTAACCCTGCCAAATTCGAATACAACAATCCGCCCGACTTTTTGGAATTAAGGAGGAAAGCTGAAGCAGAGGGTGCATTGAGAGATGACCGTGAACGTGAGTTGAGGATGCTGCAACAGGAAAGAAGCAAATGGTTGAAGGAGGAAGAAGAACTGCGAGCTAAACAAGAAGCGGCTAAAAGAGAAGCGGAGGAATTGAagcagcaacaaattttggaAGCGAAGCGACTCGAAGAACAACGAGTTAGAGAGCAACAGGAATTAGAACGTAAAAGAGCCATGGAAATGGAGAGGGTTAGAGAAGAAAAGGAGATGAGTTTTAGAACAATAGAATCGATAGCAACTGAAAAGACAAAAGCTACTGCATTATATTCCTTCAATGCACAGTCTCCAATGGAAATCAGCTTCAAAAAAGGACAGTCGCTTAATGTCATTCGTCAAATCGATGAAAATTGGTATGAAGGTGAAGTTGATAACAAGTTTGGAATATTTCCTGTCAATTACGTCGAGGTTTGGTTAattcaaattctttcaaaacttGCAGTGGTAATGACATTATTTCCGACATGGTTTGCCTGCCAAACTGTGGATATCAATAGATTGGAAATTAGAAGATCAATTCCTTTCTCACAGCTTTGCGAGAGAGAGGATACAACGAACGAACAAGATGAGATTATGGCTGAAAGAATCGAAATCGAGGAAGGCTTGGCGAAAGCAAAGTATGCCTTTAATgctgaaaatgataaagaactCAGTTTCAAAAAGAAcgagaaaatcattttgctGAGACAACTTGATGAAAACTGGTACGAAGGCGAGATCTCTGATCGAATTGGAATATTTCCTAAAACCTACGTAGAGAAGGTTCAAAATTCTGCAAATATCCAAGTAAGTTTATCGCCCAAAGAAGTAATTCAACTATTTAATCGTTTCTGGAGACCTTTAACATCAATATACCCTTATCAACCCATGAACGAGGATGAAGTGGAGCTTCTGGAAAATGACTTAGTTTACGTTCTTGAAAAATGCGATGATGGATGGTTTGTAGGTGTTTGTGAGCGGACTGGAAAATTTGGCACATTCCCAGGAAATTATGTTGTACCCGTCTGA

Transcript

ENSSJYT00000008492

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UTJ2	Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=2
O94875	Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SORBS2 PE=1 SV=3
O35413	Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Sorbs2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002141 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050384 all species →	Family	Endophilin/SH3RF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14167 all species →	SH3 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15326	TSEN54; tRNA-splicing endonuclease subunit Sen54	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.