Gene detail

Detailed information of ENSSJYP00000008137.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_047144926.1, sorbin and SH3 domain-containing protein 1 homolog isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSJYT00000008492

atgtCCACATCAATGTTTGAAGTTTGTTTAAAGGGTGGTGCTCCATGGGGATTTCGTTTGACAGGCGGAAAAGAGTTCAGGACTTCGTTACGTATCTCAAAAGTAGAAGCAAATGGGAAAGCAGATGCTGCTGGTTTGTtagtaaatgatgaaataattgCTATTAATGGGAAAAATGTCCATAATGTATACCACACTGAAGCACTTGCATTTGTTAAGAAAGCTGGAAGTGAACTGTTATTGGTGCTAAATAGtaaGACATTCGTTTGTATTCAGACAAGGACTTCCGTTACATATTTCGGATGTTCAATGTTGGGCACTTGGATATGTCTCACAAAATGCTCCTCTGCTTTCTACCTGGTTCTCACCtctttattcaaatttattgcaGATGAAGACTATTATAAACGAACATCCTCGTTACCAAGGTCGCTAGGAAGGAGGCAAAACAAAGCGGGCGACCAGCATCGATCATCCACACTCCCTCGTAAGAAGCCCGTATGTCATTTTGCTGACcgtaattattttttcaaatcttatttatgtttgaaattttgttttagtgcCAGATCAAACCTGAGCCGTCTGTTAACTGCAGATGCTAAAAAGGGAGCTTTCCGACGATATGATGGTGCAACGTCACCTGGAGCGATCTCCCCGAAGGAAGGTCGatttttgtacggttttagcgcacctgcACTtcaggtgcgggactgttggtgcATCCTGCAAACTGGTGATTACCTTCTTGAACTGATGATTCAAATGCCCAATCAATCAGAATATCATTATcgtcattattattattattattattgttatcacaCCTTCATACCTTCAACACATGACATGAGCAAGAAACGAGAGGCTAGAGGAACAAATGATGAGAGGAGACAACAACGGCATTCGGTTCATTCAGCTTGGTATCGCGAGTTTCAAAAAGGTGGAGAGATTCCCTCTACTGGATTGGCTACAGGTAAATGTTATCCCTTGCTGGCTCTCTCTAGGCCTGCCTCAACCCAACAAGGCCcaaaaacaatatattttGGACTCCCATATCAAACGCCGGATCACCGATCACCTGATGACAGATTGAGTAACCCTGCCAAATTCGAATACAACAATCCGCCCGACTTTTTGGAATTAAGGAGGAAAGCTGAAGCAGAGGGTGCATTGAGAGATGACCGTGAACGTGAGTTGAGGATGCTGCAACAGGAAAGAAGCAAATGGTTGAAGGAGGAAGAAGAACTGCGAGCTAAACAAGAAGCGGCTAAAAGAGAAGCGGAGGAATTGAagcagcaacaaattttggaAGCGAAGCGACTCGAAGAACAACGAGTTAGAGAGCAACAGGAATTAGAACGTAAAAGAGCCATGGAAATGGAGAGGGTTAGAGAAGAAAAGGAGATGAGTTTTAGAACAATAGAATCGATAGCAACTGAAAAGACAAAAGCTACTGCATTATATTCCTTCAATGCACAGTCTCCAATGGAAATCAGCTTCAAAAAAGGACAGTCGCTTAATGTCATTCGTCAAATCGATGAAAATTGGTATGAAGGTGAAGTTGATAACAAGTTTGGAATATTTCCTGTCAATTACGTCGAGGTTTGGTTAattcaaattctttcaaaacttGCAGTGGTAATGACATTATTTCCGACATGGTTTGCCTGCCAAACTGTGGATATCAATAGATTGGAAATTAGAAGATCAATTCCTTTCTCACAGCTTTGCGAGAGAGAGGATACAACGAACGAACAAGATGAGATTATGGCTGAAAGAATCGAAATCGAGGAAGGCTTGGCGAAAGCAAAGTATGCCTTTAATgctgaaaatgataaagaactCAGTTTCAAAAAGAAcgagaaaatcattttgctGAGACAACTTGATGAAAACTGGTACGAAGGCGAGATCTCTGATCGAATTGGAATATTTCCTAAAACCTACGTAGAGAAGGTTCAAAATTCTGCAAATATCCAAGTAAGTTTATCGCCCAAAGAAGTAATTCAACTATTTAATCGTTTCTGGAGACCTTTAACATCAATATACCCTTATCAACCCATGAACGAGGATGAAGTGGAGCTTCTGGAAAATGACTTAGTTTACGTTCTTGAAAAATGCGATGATGGATGGTTTGTAGGTGTTTGTGAGCGGACTGGAAAATTTGGCACATTCCCAGGAAATTATGTTGTACCCGTCTGA

Transcript

ENSSJYT00000008492

Protein

Uniprot

Gene family

Uniprot term	Description
Q3UTJ2	Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=2
O94875	Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SORBS2 PE=1 SV=3
O35413	Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Sorbs2 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050384	Family	Endophilin/SH3RF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14167	SH3 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15326	TSEN54; tRNA-splicing endonuclease subunit Sen54	-	Transfer RNA biogenesis	ko03016	deepkoala