Gene detail

Detailed information of ENSSJYP00000009935.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: CAH3143918.1, unnamed protein product [Porites lobata]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000010305

TTGACGGATAATAAATtaaggaaaataatcaatttgccaaaaattagtggaaGGGGAGAAAATgttgagaaaaaaagaaagcgCAAGCGATGTGGTAATTGTGCAGCAtgtttgataaaagaaaattgtggTCATTGCAATGAGTGCATTAacagaaaaactggccatCAAATTTGTAGGTTAAGAAAATGTTACCTTCTAAAGAAATACCAGacTCGCGCAAGACAAAATGAAGTCAAAACCAGGAATGCAAAAAAGAAGGTAACTATGAGtggtgaaaatgtttttaaacgcCAATTGAATGATATTCAAAAGGCAGGAAACAGAATTAAAGCGATGTCtggttttgaaaacaatgaaaagttTGTAGAAACCGCAATGGCCTATCAGCAAAGTGATGAAGGATTTTTTAAAAGCAGCGATGAAAATATGATCGATTCAAAAATCAAGttaaatgatGTTTCTAATTTTCACAGATTCTGCATCGAAGGAAGTGCATTAAGAATTGAACGAGTTGCAGTGGCAGCAAAGGAAGGGAAAAATCTGGAAGGGTGTCCAATCGCAAAATGgGTTCTGCGAAgatcaaatgcaaatgaaaagataaTGGTTATTGTAAGGGAAAGAAAAGGACATTATTGTGAAGATAGGGtgattgtcgtttcaattgtTATCTGGGATGGAATAACAACAGAAAATGCTTCTAATTTATACAAAAGATTAACTTTCTTGTTGAACGAGCATGCAACCATGGTAACAAGAAGATGTGGAAGTAATGAAAAaaaGAATTGTTGTTGCCAGGGGATGGACCCAAACACATGTGGTGCCTCGTTTTCATTCGGGTGTTCTTGGAGTATGTTTTATAATGGTTGTAAATTTGGAAATAGTGTTTCACCGAGAAAGTACAAGATGGAGAATCCTAAAAAGGAAgaagaattaaagaatttgtttgaaaatcttgCAACTGAATTTTCACAGAAGTGCAAAATGTTTGCACCAAAGGCGTTTGATAATATGacattttatgaaaatcttgGCTCACAGTGTCGAATTGGCCATGGAAAGGGACGTCCATTTTCTGGAATGACCTGCTGCCTTGACTTTTGTGCACATAGTCACAAAGATTTACATAACACAAATTATGGAACAACTATGGTACTGACACTGTTGAAAAAAGGAATCCAATCAAAATCGCATTGCAGTGAATtgaaagatgataatgatgataatgatgataatgatgataatgatgatgaacagCTGCATGTTCTTCCGTTTTATCATTTAGTTAAAGAAAATGGCGAAGTTTGCGAGCCAAATTACAACATTCCAAAACATACTCTGAAAAGTAAAATCATCCCCAAAATGGAGAAATTTACAAAGGATTCGACGAAAGGAATGGTTAAGCGTAAACCCGGTAAGAGGCGAAATTCAAAATtagtagagaaaaagtttgaaagaCGTTATGAAAAGTTAGATACGATagagataaatgaaaatgctgcTGCAGATACGGTAAAAGAAGATTCAGGGGTAAATCAGGTTAAACTGGATGATGAAAAGTATCAATCACCGTGTTCGATTCAAAACAATGAGTTAAATACTTGTGAAAATGGTGGAATTGCTGAGAACTCATTTGATGATGTATCTTACATTGATGAAAGGAATATCCCTTTAATGTTTTCGAAAACAACGCAAGGTTTTAACAACTTGAAGAAAAAATCAGTTTCCTTGCAAGAATTTATGCCTAAAAGACCACGATTGCAACATGTAGATGATTTTAAACTGATGATGTTTCGCCAACAAATGCCATTTGTAGATAATGAACTGAATTCGAAATTGCAGACAAAAAACCCATCAGGTGAAGATCAGGATTTACGAAAGAGATTGGGTTTCAAGCAAATAAATGACAAAGAATTCTTTCCATATGCATGTAATGAACTTAATGGTAAATGTAAGAATGAAATTAGAGATATAGAGACAGAAATGACCTCCTTAACGACAAACAATTTTGTTACAAATGATATGGGCGGTGTTTCAATAGCATTAAGTCATGGATCAATTTTAATCGAATGTGCAAAAAAAGAAGTCCATGCAACCACGCCCGTACAAAACCCTCAACGACAACAACCAACTAGACTCAgcataattttttatcaacataaaCATCTCAACGACCCAAATCATGGTTATGAacgaaataagaaaaagatgGCTGAAAGGTCAAAAAGAAATAGTTCCCTAAGCAAACATCCATTAAGTGATTTAGAATTATTGGCTGAAGCTGCTTATATGAAAGGCGAAAGTTCAGCGAAAGAGGGCTTAGattttgtcaaagaaaaataCGCTGATAGCAGAGAATACTGCAATTCAAGTTTGTTATTACAAATGCATTCAGTTGGTGATAGATTGACAAGTAGTGGGGAtgatcaaagaaataaaatgcatCAATGGAAACTACAGCAGCAGCAATggaatcattttcatcaagaaCAAGAACAACAACGTTATTATGATAATCTAGTCAAACAGCAGCATCAACAACAATAtaatcaacagcaacaacttTCATCTGGACAACTGCGTCTACATTGGAATCATTTGGATaggcaacaacaacaattccACCATTTGAACCATCAACATCAGCAGCAACGGAAACAGCCTCACTGGAGCTTTGAtagacaacaacaacaacaacaacagatCTGGAACCTTGAAGAGAATGGACAGCACCACcaacaaaaaggaaatttttactACCATTGGAATGAACAAAGAACAgaacaacaacagcagcaacaacatcaTACATGGCATCAAATTGGACAGTTCAATACAGATGAAATCTATCCATATTTTGAACAAcgacaacagcaacaacagcaacaacaacataaacaacaacaacagcataaTACGTGCCAGTCATTGAATGTTGTAAATGATTTGAATATGATGGCAAGAAACAAACAGCCTTCGGCTTTGTTTAATGAAACTCAATACaatccaattcaatttaaCTCAGAAACATTTAAGGAACATTCTCAAATCTTTGAACATAGGATGAATGgtgttttatcaaatttatcgaaagaaaatgaaaatgacgataaaattttcaagtctGCTTTTTCAGTCAGCTCCTTGCTGGGGTTAAatgatgcaaaagaaaaagaacatgAATATGATTacaatttcttaaaagaaGAATCAACTCATTTATCAACTTCCTTTACAACCGATCAGCGCCTTTTTGATGGGCGTCAATTTTCTTTGAACCCGAATGAACGATTTACGTGGatacaaaatatgaataaaattgatgGAGATACaacatttaaatatttgaactCGTGA

Transcript

ENSSJYT00000010305

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8NFU7	Methylcytosine dioxygenase TET1 OS=Homo sapiens OX=9606 GN=TET1 PE=1 SV=2
Q3URK3	Methylcytosine dioxygenase TET1 OS=Mus musculus OX=10090 GN=Tet1 PE=1 SV=3
Q6N021	Methylcytosine dioxygenase TET2 OS=Homo sapiens OX=9606 GN=TET2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005310 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12851 all species →	Tet_JBP	Oxygenase domain of the 2OGFeDO superfamily	Domain	Interproscan
PF02008 all species →	zf-CXXC	CXXC zinc finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024779 all species →	Domain	2OGFeDO JBP1/TET, oxygenase domain	Interproscan
IPR040175 all species →	Family	Methylcytosine dioxygenase TET1/2/3	Interproscan
IPR002857 all species →	Domain	Zinc finger, CXXC-type	Interproscan
IPR046942 all species →	Domain	Methylcytosine dioxygenase TET1-3, oxygenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23358 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006211 all species →	Biological Process	obsolete 5-methylcytosine catabolic process	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0070579 all species →	Molecular Function	5-methylcytosine dioxygenase activity	Interproscan
GO:0080111 all species →	Biological Process	obsolete DNA demethylation	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000009935.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.