Gene detail

Detailed information of ENSSJYP00000009979.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_029213662.1, cleavage and polyadenylation specificity factor subunit 5-like [Acropora millepora]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7T3C6	Cleavage and polyadenylation specificity factor subunit 5 OS=Danio rerio OX=7955 GN=nudt21 PE=2 SV=1
Q6DJE4	Cleavage and polyadenylation specificity factor subunit 5 OS=Xenopus laevis OX=8355 GN=nudt21 PE=2 SV=1
Q3ZCA2	Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus OX=9913 GN=NUDT21 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007722 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13869 all species →	NUDIX_2	Nucleotide hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000086 all species →	Domain	NUDIX hydrolase domain	Interproscan
IPR016706 all species →	Family	Cleavage/polyadenylation specificity factor subunit 5	Interproscan
IPR015797 all species →	Homologous_superfamily	NUDIX hydrolase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13047 all species →	PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0005849 all species →	Cellular Component	mRNA cleavage factor complex	Interproscan
GO:0031124 all species →	Biological Process	mRNA 3'-end processing	Interproscan
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan
GO:0017091 all species →	Molecular Function	mRNA 3'-UTR AU-rich region binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14397	NUDT21, CPSF5, CFIM25; cleavage and polyadenylation specificity factor subunit 5	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.