Gene detail

Detailed information of ENSSJYP00000010504.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047146068.1, supervillin [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000010912

ATGCTTgaatcaacaaaaatataCGAAGTTGAAGAAACAGATGATGGAGAGACAGAACTTGTTTTCTTGGACCAATATGTCGGAAAAGTTCCCTCAAAGAAATGGCTTTCGAGTGAAAAGGCTTACGTTCTTGATTTTGGTACGGAAGTTTATGCTTGGATAGGCCGTGATTGCAAGGGCAAATTGAGAAAGAAAGCTGTTGATCATGGCCTCGAAGTTTTCGAAGaagatttcaaaacatcaGCTCCCGTCAACCCGCTTTTCCCGAATGAAGAAAACCCAAAGAAGAGGCGAGGCGTGCCGAGACCGGAATGGGCCGTGTTTGGTAAAATGACAGAGAAATCCGAGAATGTTTTGTTCCGGAGGAAATTTTTTGACTGGCCTGATCCGGTTAACTTGAAGCCGAAAACAGCAGAGAGCAAAGTCCATGAAcaattGACAAGAGATTTGAATGATTATCAAAATGCAATTGAGCTTGAACCAATCGATGGAAAGATCATGGCAAAAGAAACAGAAGGTCCAATTATGATAGTAAAtgaaatgCTAATAGGAAGAGGCAAAGGTGGTCAAGACCCGGAAACATTGTTCAGATATGCCGTGCAAACAAACGAAATCAAAGCCTGGAGAATTGTGGAGAAGACTTCAACGAAAATACCAGAAAATGAATTTGgctttttcttttcaggaGAATCCTACATTATTCGTTGGAGCTTTCAATACATGCGCACCGGGATTCGCAACATTAAAGGAGGCAGATCAAAACAAGACGATATTGGTAGAGATTGCTTGCTGTATTTTTACTGGCAAGGCAAAGATTGTACAGTTGCTGATAAGGGCACAGCAGCTTTGATGATGTCAGAGATAGATTCAGATGAAGGACCGCAGATGCTTGTGATGCAAGGACAAGAACCTCCAGCCTTTTATCAATTGTTTGAAGACGGAATGATCGTCAATTTGGGAAGACATTCGgaagatgaaaaattcaaaaatacgAGAATGTATTTCGTAAGAAACGAAGGGGAAGATGAAAGCTGTATGGTTGAAATACCTGTCACgTCAGCCAATCTGAGATCAAGAGGCTCAATAATAGTTTGTGATCCACCAGAGAAGACAATTTATATATGGCACGGAGTTAAGGCTACAGAAGACACACAAAACAGAGCAATCAAATGTGCGAAAGGTTTCAGGGATAAagTAAAGGTCCTTTACCAAAAGAGATTTAAAATTGAGGAGATGGTTGAAGGCGAAGAAGAAGATGCGTTCTGGGATGCTTTgggtgatgatgaagattatgtgtcatacttagGAGTCACAAAGGAATTCGATTTCACGCCTCGTTGCTTCAGTTTTGCAAGTTTACACAATGCGTTTGTTGCCAAGGAGATCACAAGTTCAACATTCCACCCTGGGGCTATATGCCCCTTCCCGTTGTTGCAAGAGGTTCTGTACACTGCTCAACAACCAGCCCTGTTCTTCATTGATGCCAAACACAAGATGTTTTTATGGCAAGGTTGGTGGCCAGTGAGTGACGAAGAACACGAAGAAGAGGTTGGCCCAACAACTGCCGCTGAGAAGCATCGTTTTGACGTCAGCAGAAAGCTAGCAATGCAGTCAGTTGTCTCCTACGCAGAGGCTGTTGGGCGGccaatatcaaaagcatacaTCATTTACGCTGGCTTGGAGACTCTAGAATTTAAAAATCTGTTTCCACATTgggaagatgaagatgaaatagCTGATTTGATGAGAAAGgCTGGTAAAAAGAAGAGTGGAAGATTAAAGTTAGAGGatgaattaacaaaattgCTCAAGAATACGTATAGTTTGGAACAATTAATGGAACGACCGTTGCCAGAAGGTGTAGACCCAACTAGAATTGAACAATACCTTAACGATGACGAGTTTACGTCAATGTTCAAAATGACGAAAGAAGAGTTCAATAAACTGCCAAAGTGGAAGCAAATTCAgctaagaaaagaaaacaagtttttttaG

Transcript

ENSSJYT00000010912

AGATAAAGACGATGTCCTTGACGATGCTGATTACGAAAAAGGAATGCTTgaatcaacaaaaatataCGAAGTTGAAGAAACAGATGATGGAGAGACAGAACTTGTTTTCTTGGACCAATATGTCGGAAAAGTTCCCTCAAAGAAATGGCTTTCGAGTGAAAAGGCTTACGTTCTTGATTTTGGTACGGAAGTTTATGCTTGGATAGGCCGTGATTGCAAGGGCAAATTGAGAAAGAAAGCTGTTGATCATGGCCTCGAAGTTTTCGAAGaagatttcaaaacatcaGCTCCCGTCAACCCGCTTTTCCCGAATGAAGAAAACCCAAAGAAGAGGCGAGGCGTGCCGAGACCGGAATGGGCCGTGTTTGGTAAAATGACAGAGAAATCCGAGAATGTTTTGTTCCGGAGGAAATTTTTTGACTGGCCTGATCCGGTTAACTTGAAGCCGAAAACAGCAGAGAGCAAAGTCCATGAAcaattGACAAGAGATTTGAATGATTATCAAAATGCAATTGAGCTTGAACCAATCGATGGAAAGATCATGGCAAAAGAAACAGAAGGTCCAATTATGATAGTAAAtgaaatgCTAATAGGAAGAGGCAAAGGTGGTCAAGACCCGGAAACATTGTTCAGATATGCCGTGCAAACAAACGAAATCAAAGCCTGGAGAATTGTGGAGAAGACTTCAACGAAAATACCAGAAAATGAATTTGgctttttcttttcaggaGAATCCTACATTATTCGTTGGAGCTTTCAATACATGCGCACCGGGATTCGCAACATTAAAGGAGGCAGATCAAAACAAGACGATATTGGTAGAGATTGCTTGCTGTATTTTTACTGGCAAGGCAAAGATTGTACAGTTGCTGATAAGGGCACAGCAGCTTTGATGATGTCAGAGATAGATTCAGATGAAGGACCGCAGATGCTTGTGATGCAAGGACAAGAACCTCCAGCCTTTTATCAATTGTTTGAAGACGGAATGATCGTCAATTTGGGAAGACATTCGgaagatgaaaaattcaaaaatacgAGAATGTATTTCGTAAGAAACGAAGGGGAAGATGAAAGCTGTATGGTTGAAATACCTGTCACgTCAGCCAATCTGAGATCAAGAGGCTCAATAATAGTTTGTGATCCACCAGAGAAGACAATTTATATATGGCACGGAGTTAAGGCTACAGAAGACACACAAAACAGAGCAATCAAATGTGCGAAAGGTTTCAGGGATAAagTAAAGGTCCTTTACCAAAAGAGATTTAAAATTGAGGAGATGGTTGAAGGCGAAGAAGAAGATGCGTTCTGGGATGCTTTgggtgatgatgaagattatgtgtcatacttagGAGTCACAAAGGAATTCGATTTCACGCCTCGTTGCTTCAGTTTTGCAAGTTTACACAATGCGTTTGTTGCCAAGGAGATCACAAGTTCAACATTCCACCCTGGGGCTATATGCCCCTTCCCGTTGTTGCAAGAGGTTCTGTACACTGCTCAACAACCAGCCCTGTTCTTCATTGATGCCAAACACAAGATGTTTTTATGGCAAGGTTGGTGGCCAGTGAGTGACGAAGAACACGAAGAAGAGGTTGGCCCAACAACTGCCGCTGAGAAGCATCGTTTTGACGTCAGCAGAAAGCTAGCAATGCAGTCAGTTGTCTCCTACGCAGAGGCTGTTGGGCGGccaatatcaaaagcatacaTCATTTACGCTGGCTTGGAGACTCTAGAATTTAAAAATCTGTTTCCACATTgggaagatgaagatgaaatagCTGATTTGATGAGAAAGgCTGGTAAAAAGAAGAGTGGAAGATTAAAGTTAGAGGatgaattaacaaaattgCTCAAGAATACGTATAGTTTGGAACAATTAATGGAACGACCGTTGCCAGAAGGTGTAGACCCAACTAGAATTGAACAATACCTTAACGATGACGAGTTTACGTCAATGTTCAAAATGACGAAAGAAGAGTTCAATAAACTGCCAAAGTGGAAGCAAATTCAgctaagaaaagaaaacaagtttttttaGACATTTGTGaggaatttttgcaatttttaatagttttaaTGGATAGGTTTCGTGTCATCTACCTAACGTAGGTCCTTGTTTCGCCCCGTAGTCTTTCACTGATTGCTACACTCATCAGATACATAGCAGAAAATGTACCTGGCTGCATTCCGGACCCATAAGATTGCAGATCAATCCACTTTTTTATTCCGGTGACATGCAAGGACCTGGATGCGGTCCAGTCCAGCCTGCATCTATAACCAGGCTGCGTTTGGGAACCTGTTTGGTTCAAACATCCATCTACGATTGAATCCTATAGCTTGATACGACCGGTCACTTTCCGGATCCAGTTGCTCTCATCTATTTATGTTTCCATTGTCACTGACCTTCAATATttcgtttaattttgattcCCGCAACCCCAGGATGAACAATTTAGTTATTAGACTGTATGCATCGCAAAATTACATTATTACTTTTAACGAATTTACCattgtaaattatttaaaaaacgaTAAATTCTTAAAACtgcttaatttatttaattcattttgaattcaagCATGATTGAATGTGTTGTAGGACTTTTTTCGTGCATGGAGattgttcagttcagttttagGCCACCGTCTTTCCCAAACGCTCAACGTAATGGCGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O46385	Supervillin OS=Bos taurus OX=9913 GN=SVIL PE=1 SV=2
O95425	Supervillin OS=Homo sapiens OX=9606 GN=SVIL PE=1 SV=2
Q8K4L3	Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001059 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02209 all species →	VHP	Villin headpiece domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003128 all species →	Domain	Villin headpiece	Interproscan
IPR007122 all species →	Family	Villin/Gelsolin	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR036886 all species →	Homologous_superfamily	Villin headpiece domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11977 all species →	VILLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0005546 all species →	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008154 all species →	Biological Process	actin polymerization or depolymerization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0051014 all species →	Biological Process	actin filament severing	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051016 all species →	Biological Process	barbed-end actin filament capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08017	AVIL; advillin	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.