Detailed information of ENSSJYP00000010907.1 in Catostylus mosaicus

Genomic Location: chr6:1994946...2002169
NR annotation: KAG9485022.1, hypothetical protein GDO78_008242 [Eleutherodactylus coqui]
Species Catostylus mosaicus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5GLZ8Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1 SV=1
Q5PQN1Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1
Q6PAV2Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007801 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR051709
all species →		FamilyUbiquitin ligases and GTPase regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45622
all species →		UBIQUITIN-PROTEIN LIGASE E3A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05486IL36B, IL1F8; interleukin 36 beta-Cytokines and neuropeptidesko04052deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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