Gene detail

Detailed information of ENSSJYP00000010948.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_033639785.1, mediator of RNA polymerase II transcription subunit 16-like [Asterias rubens]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSJYT00000011436

ATGCAGAAGCTATTTAAAACAGAATGGGACAAAGACGAGTCTGGATTGCTCTTCAAATCAAGAATTGGACAGCCAACATGCACGTGGTCTGCAAGAAACCTGGTTGCTTTTACAACCGGATTCGTGGAATCAAACGAGGCTAGGCCATGTTTGTCAACAGTGACTATCCATGTGATGTGCCCAGAGTATCCGTGGGAAGTCTACCATATAAAAACGGATTTTAATGATCGAATTGAGCATTTAATATGGGATAAAAACAGCACAAGGCTGCTTGCAATCGATTGCAATGGAGTTTGCAAAGTTTATGGAATGCataaaaacatgataaatTGTTGGGAGGTCGTTCATGAAGTAAATTTTGAAGGGAGAGTTGTATGCACTGCTTGGCTTGATCCAGGGCCTAGGGttatttttgatgcaaaagcCAGTCATGCTAACTTGCTTGAAAAATTCCCGAAACGATACATCAAGTCATGCCTTGCTGATATTGCAGGCCTCAACAAAGATGGCTTTGTTGTGACCACAGAGACTGGAATAGCCAGTGTTGTTCTTGTTGAAAAAGGTTCTAAAACTCTGAAGGCTCATAAAACTAAACTGTTTGCAAGTAGATGCAGAGTGCTGCTAGGTGATGTGTGCTTTAAGGAAGACGGAAAGGTTTACATCATTTTGGCAACTGACAGAAGAGTTGTTGAGTTTTTTGTTCTGAGCTTGAGACTAACCAGCTCTAAGGTTGATATTTCAGTAGAAATTTCTCCATGTATTGTCCCGCATCTCATATCAGATGACGAATACATGACATACCATGTCTCATGTGTAAAGTTTagcaatgaaaagaacttAGACAAGATTCTGATTTGTACAGAAAGTGGTTCCATGACCTGTTTCAAATACTTTGAGTTGAAGATAGAAAAAGCAGCTCTTCAGGCCGTGTTGCAAAGAATGCAACAAACACCAAAGATTATAAATGTTAAAGAATGGGTTTGCTCGAAATCAGTGACAATTAGGGGACGGATTGCTTGTATAGCCCTAAGCAGGATCATCAATTCTGGCCAATCTGGAAGTGATGTGCCTATATACCCTACAATTTTAGTTGCAACTAAAGAGGGGTCATTAGTCACACTATCATCTACTTTGTCTGACATTGATACTTCAACCCTCTTGTTTCAAGACGAGTCAATAACAACCTTAGTGTACTCTCCGAATGATACTTGCATCCTATCTGTCACAGATAGTGGCAACATAGCAGCATTTCAGGCCTGCTCACTCAATTCTATGGCAGAAAGTGTTTCAGTTAAAACATGTGTTAATCTTTTTGAATACTGTCTGTTAACTGGAAGCTCCCCATGGGATGTGACCATATTTGCTGCTAGGCATGGAGAGAAGTTTTTAGAGCAGTGCTGTCAGTACCTAAGAAGCAATCTTACAAGTCAGCCGTCAATGACGCAAGAAAGAATGTCAGCTTCCCATGCTCAGATCCAAGCAATGATCTACAAGGGTTTAGATGGTCTTTATTTTGGCTCAAATGAAAGCTACAACTTCCTCATGTTGAGGGCAATATACTGCTACCTTCATTCTACAATCAATTCCATGCCATGTGAGAAAGATGCACAAATTCTGATGAAGATTAAATCAACATGCAACAGAGTTTTAGATTTTGATCTGGCTAAAGTTTTACAGGTTATAGATGCTAAGGATGCATCATTTGATTCTCATATGATTTCAACAATGCATTATCTAACCCAATGGATTGCAAATTACTCAATTCAAATATGTAGATTGGTTCTCTCTTCTATCAAGATGGGAACCAGCAAGCAAATTTTACCAGTTGTGAGCGTTCAAGGTTTGAAGATGCTGAGGGAGATGCTTTGCCTGGTTTATCTTTGGGGTCAGTCTTGCCCAGGGTGGCAGCCACACTTTCTAGAGTTAGGATTTCCATCAGAAATTATTTCTCAGATCTTCAAACTTGTATCAAAGCTGTGTTTGAAGTTGATGCAAAGTGACTCTAGTAAAGATGTTGTAAGCGAGGACGAAATTCCAATGAGGGCTCATGCAATGATGTACCAAACACCAAATGCCAATGACCCAAAATGTGGTGCAATCAGCCAGTGCATGTACcaaagcaatgattttgattattatgTTTTCTCATCTGAAGAAGATACGATGACAAGTGCACAAAAGTACTCTTTGCCTCAGCCTCTTGAGCAAGGAATCTCCTACAATGATGCCTcaagtaaatttttctttgatgcATTGAACCACTTTCAGACATCACTCATGAAAGGAGAGACACTAAAGCAATGCATCCAATGTTCTTGTCTGACCCTTAGCATGACAAATTCCGCTCGTTCATTGCTTGGCTCATGGAAGGAGCAATGGAGAGATGTTTGCTTCTGTGGTGGGTTGTGGAGAGCACTTGATgaacaacgcaaagggGTAGGAATACGATGCAAAATACGACAAgattaa

Transcript

ENSSJYT00000011436

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20719	Med16_C	Mediator complex subunit 16, C-terminal	Domain	Interproscan
PF20718	Med16_bridge	Mediator complex subunit 16, central helical bridge	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048338	Family	Mediator complex, subunit Med16	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR048339	Domain	Mediator complex subunit 16, C-terminal	Interproscan
IPR048616	Domain	Mediator of RNA polymerase II transcription subunit 16 , central helical bridge	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13224	THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15159	MED16; mediator of RNA polymerase II transcription subunit 16	-	Transcription machinery	ko03021	deepkoala