Gene detail

Detailed information of ENSSJYP00000011639.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_002160003.4, putative pyridoxal-dependent decarboxylase domain-containing protein 2 [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000012158

ttcCTTGCAACACCATGTTCGGCTCATCATATACAATGGATGTTGCTGCGTTTGAGAGACTTTTGACAGATGACGTGTCATGTGGCAAAACGCCTTTGGTTTTGATCGCATATGCAGGCACACCTTCCACTGGTCATGCTGACAACTTGAGCAGATTAAGAGAAATTTGCACGCAGTCAGGTGTTTGGTTGCACATCGAAGGTGACTCCCTTGCAACCCTTGCCTTAAAGAAAGTTCCACCCTCCGTAGCACCAGCAACTAGCGCAGACAGCTTGACCCTTAAGCTTCCAAATTGGTTTGGTGCTACTAACATCCCGTTTTGTACATCATACAAGACGCCTAATTATTCGCTGGCAGAGTCGAGTGACCTTGTTCCAAAACACATCATCGAAAAATTGACCTGCTTACCTTTATGGATGCTTATCAAATCTACTGGCTCAGACCAGCTTAGAAACATCATAATTAATGCAGCAGAATTGGCCCAACAACTTTCTCATCGAATAGACATGATCTCTGGGATTAAGAGGCTTGAACAATCCAACGTCACCTCCCCAACCGttgttttcaaatacaaaGCATCGCCAACGATTTCTTACAGTTCTTCGAATTCTTTGGAAGATGATGAAGACGATAGCCCATCCCATGTTGCTGTGCAGGCTGCTggaacaaaaacaacaatcgATGTATCACCAAAACTTTGTGATGCCATGAATCAAATTCTTGCGGAAAAGTTGCAAAAGTGCTGcgaaaaagttgaaatagaAGTAACACAAGTGTTACGCGAGGGTTGCTGTATGTTATTTAGTCCTTTAAGATCGGCTCGAGCCTTAGGAACAGGAAATGATGACATTGACCAATTTGTCGAAGATCTAGAAAGGGAAATCATGAAATTGGATTCCACGCTCATCTCTCGAAATTTCTTTGACGAAGCTTTCCACACAGTCTCCGATCTGCATTTAATTGATTCGTCTGAAGAGCCGGTTGTCGGGTCCTTCCAATGCATACCAAAATACTGGAAGGTAAAGGACATGTCGAACCTAAGTGACAGCAAGAAACGAGAAGCTAATGACCTTAATAATAACATGTTAGGTCAACTgtcaaaagaatttgattATCTAAGCGAAGGAAAAACAGCCGAGGGGCAAATGTTCATTCGTATTGGAGTGGTTGATGAGTCATTTGATTTACATGCATTATCTGAAAGAGTTCAACAACTTGCAGAAGAGTTGGAGGACAACTCCAAGttcttaGAAAGTTTGAGTGATGCAGTGCAAAAAAGCATCCATGAAGCCGAAGCTGTTTTACAAAGGGAATCAGaagaaaagttttttgaaGAGGGTGTCCTACGTCATGTTCCTTTGATTGGCTCAGTTTTCAGCTGGTTATCTCCTCCTGCCAAAGAATCACATGGTGTCACTGGCAGAGCTTTCAATCTTGCTTCAGGAAAATTGAAGACAACTGAAAGAAcctacaaatacaaaatgcaactccaaaatgatgatgatgaagatgccgTTGTGGAGGAAAATGCTGCGCAAGGGTCCTCTCAGAATTCATCTACcaatgatgaaaagaaaatcgaTGACGAAACTCAAAATGCTGCGGAAGAAAATGCTGATGTAAATGTGGAGGAGCCTTCAGAGGGAGCCGCTGAGAATGACGTCAAAGAAAAGGAGATTGAATCACAGTCAGCCTCCCATGGGGATTCAGACAGTAATGTAAACGAGGCCACAGGAGAGGCAACTAGTAACGAGAATAGCACAGATAAGCCTCAAAGCGAGATTGGGGCTAACACTTCATCAAATGATAACGAGGTTGGAGAAGAAGTTAAGGAGTCAGATGTGTaggagaaaatttttaaagaaatttagtTTATGATACATGATAGCGGTTTGGTTTATGGACCCCCGGGGCCTGTGAACAGTGTTTTACTGCAATTGGCATAGGGCTTGAGCACATTGTATTAAGTCGACGACGGGGGTAAGATGCAACATTTTGACCCAAAAGGAAGGTTTGAATTGGACGCAAAAGGGATTGGAAAGAAAATGGAGGGCAAGCAACTGTATACATCAATAGAATTTCAATTGTGATTCAAACATGAATGGGATCTAAATGGTTCTTTCTTAATTCCTGAAGATTTGTAATGCTTAAATATCCAGACATTGGATGATTTCCTTCGATCCATTTTCGACTTTCTCCTCGTTCCATCACATTTAATGCTGTccagatgaaaatgatttatgtCTCAATGCAAATGTGGTTCacctatttcattttatgatcGCTATTGTTAGTTTTGCAAACATTCCCGTTAAATACAAGCTGATTTCATTAGTTGACcttagaatagaatagactTTCTTTCCTTACATACAACGAAATTCCGATaatattcatttaaatttgcttttttggGCTGAAATTTTCACCTAGTAGGCTGCCAAGACCTCGGTTCAGCTGTGCTGAAGCAAATATTTCTGTCAGGGACTGCAGTCCAAATCAAAAAGGGCTGGGATGTTAAATGATTCTAGCAATCTTTTTATTCTCTAATCTCGAAGGTTGATCTCTGAAGGTAAACATTAATGCATAAGAATTAGTCTATTTATTGTGGATGCAAAAGTAGAAAGTTAAGTCGTTTCTTAGAGTAAGAGACCAATAAATGATTCAGATTTATGTTTAATAACCCAAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7MBC2	Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PDXDC1 PE=2 SV=1
Q6DF78	Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=pdxdc1 PE=2 SV=1
Q99K01	Pyridoxal-dependent decarboxylase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Pdxdc1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005296 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282 all species →	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR002129 all species →	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR050477 all species →	Family	Group II Amino Acid Decarboxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42735 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016830 all species →	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0019752 all species →	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000011639.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.