Gene detail

Detailed information of ENSSJYP00000012845.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: EDO48557.1, predicted protein [Nematostella vectensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000013412

CACGAAAGTTCACGGCAAATGAAGTCGAGAGAGAAAGTGTAAAGACTGGTTTACAGTTGCTTCGCCGATAAAACAAGCTACCAAGATTTCTCTCTTTTGGAGTTTGGAGGATTTGCAGGCCGCAGAAGCCGCCCTGGAATCATCCGACGAAAACAACGGTGGAGAGTCACCGCCACCAGAAAAGAAAGCTCGCCTAGCAGCATCATCGGAATCGGTCAGTTCTGACCTGGTAAACTTCTCTACCTTTAAATTTAAGGAATCAAGTGTTATGCACGGCGAAGTTCGCACTACTCAGTCTGGTGGCGACAAAGAACACAGTAACACCAATGGAGAATTATCGTGTTCtaaattaattgcaaatggtggCGGTGACGTAGATCAAGCAACTTCAGTCGAATTAAAACACAAACTGAGTAGGTTCGATGGAGAGGTCATTCGACTTATCGGACAACACCTTCAGGATATGGGACTACATAAAACTGTCAGTACATTAATGAAGGAGACAGGATGCAAGCTAGAAGATCCTGCTGCCTCTGTTTTCCGAGATTGCATTTTGATTGGTGACTGGGACAAGGTAGAAATGGTTCTAAAAGAGCTGCAGCCATTATTGGAAAGAGGCAGTAGTTTTAATGAAATGAAGTTCTTAATCTTGGagcaaaaatttttagaattattaGAGGATGGTAGAGTTATTGAAGCACTGCATTGTTTGAGGTTGGAAATAACACCATTGCAGAGTAGTCAGTCAAAACTACATGAGTTAAGCAGttTACTCATGTGTAGCAGCTCTGAAGAACTACACTCAAAGGCAAAATGGGAAGGTAAAGGTCCTTCAACAAGAcaaacacttttcagaaaGTTACAAGAATTCCTGCCCGTCTCTGTCCTGCTACCACCAAAAAGATTAGAGTCCTTACTTTGCCAAGCAATCGAattacaaaaatcaaattgtataTATCATAATACGACGATGGATGCAGAGCTGAGATCATTTTCTCTGCTTAATGATCATTTGTGTGATAGtaaacactttccTTGTGATACGAAGCAGGTTCTGTCAATTCACTGTGACGAgGTTATGTTTATCCGCTTTTCTCATGATGGTAAAAGGTTAGCAAGTGGCTCTAAAGACGAATCTGTTATTATATGGAATATTGAAGATGATGAGAAGTTAGTTCAATTTCGCACGCTAGAGCGACACAATCATGGTGTATCTTATCTAGCATGGAGCCCAGATGATAGTCAATTAATTGTTTGTGGTACAGATGATTGCTCAGAATTGTGGATTTGGCATGTAGAGACTGGTGAACTAAAATGTAGAATGAGCCATTCCCCTGAGGATAGTTTAACCTGCTGCGCGTGGTATCCAGATGGAAAGAAATTTGTGACTGGTGGTATGAGAGGACAGTTTTATCAGTGTGATCTAGAAGGCAATGTGATTGAATCATGGGAAGGTGTCAGAGTTTTAGGACTTCATGTATTAGAAGACAACGAAACTGTTCTTGCGGCGGATACGCACATGAGAGTTAGAAcatacaattttgaaaataacagaGACAGTGGATTGATTCAAGAAAGTCATTCTATTATGTCATTCAATACATCTAGTAACAACAGATACATGATACTGAATGTTGCATTGCAAGGTGTGAATCTCTGGGATATAAAAGACAAGTCGCTTGTCAGGAAATTCAGAGGTGTAACGCAAGGGTTTTATATGATACACTCCTGCTTTGGTGGATTGAACGAAGATTTTCTTGCCAGTGGTAGTGAAGACAACCATGTTTACATTTGGCATCAAAAGATTGAAGGTAGACCAATAGCAACTTTAAAAGGACACACAAGAACTGTAAATTGTGTAGATTGGAACCCAAAGATTCCTAGTATGTTAGCATCTGCCAGCGATGACGGAACTGTAAGAATCTGGGGTCCAAAAGCCAGAACCGAAGACAAAGAGATTCAATAAATGGCTATTGAAACATTCCAGATACTTTTGTAATGCGATGAAATCTTGGCCTTTGAGAGCATTTGGCGGAGAGGTTTACTGTAATCTCTATCTACTTCTGAACAATTGGTTTCTTTTGTAACAGTTTGTATTATTTTAGTGGAATAATAAATTTATCCATTAACGCGAAGAAAAACTTGTATGTGACATAGCTATGCTGAGCTTGATCGAGCCCAAGTGTTGTCTGCCTGTAGAATAGTTCACACAGTAAAACTACAAGATAATCATCTGTGGAAACGTGATAGTTTTCTTGTTCTGGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C6G8	WD repeat-containing protein 26 OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=3
Q9H7D7	WD repeat-containing protein 26 OS=Homo sapiens OX=9606 GN=WDR26 PE=1 SV=3
Q5SP67	WD repeat-containing protein 26 OS=Danio rerio OX=7955 GN=wdr26 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007115 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF17814 all species →	LisH_TPL	LisH-like dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR006595 all species →	Domain	CTLH, C-terminal LisH motif	Interproscan
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR051350 all species →	Family	WD repeat-containing signal transduction regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22838 all species →	WD REPEAT PROTEIN 26-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0034657 all species →	Cellular Component	GID complex	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22382	WDR26; WD repeat-containing protein 26	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.