Detailed information of ENSSJYP00000012888.1 in Catostylus mosaicus

Genomic Location: chr4:13042352...13044070
NR annotation: AAQ96733.1, bzip transcription factor C/EBP [Podocoryna carnea]
Species Catostylus mosaicus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P17676CCAAT/enhancer-binding protein beta OS=Homo sapiens OX=9606 GN=CEBPB PE=1 SV=2
P28033CCAAT/enhancer-binding protein beta OS=Mus musculus OX=10090 GN=Cebpb PE=1 SV=1
P21272CCAAT/enhancer-binding protein beta OS=Rattus norvegicus OX=10116 GN=Cebpb PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002503 (this species only) · gene tree & orthology
Transcription factor familyTF_bZIP · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07716
all species →		bZIP_2Basic region leucine zipperCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031106
all species →		FamilyCCAAT/enhancer-binding protein C/EBPInterproscan
IPR004827
all species →		DomainBasic-leucine zipper domainInterproscan
IPR046347
all species →		Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23334
all species →		CCAAT/ENHANCER BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000012888.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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