Gene detail

Detailed information of ENSSJYP00000013451.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047132067.1, uncharacterized protein LOC105847408 isoform X2 [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000014036

ATGGCATCCAATTTTAGATCGAAGTCTTCCCAAAATCAAGCAACCTTATTTCAAACATGGGGATACTCCCAAGAAGCAAAAGgggtaaaaagtaaaaatggaGATCAAATATTGGTTGATGATGATCTTGATGACATATTAGAATGTTTTGGAAATGATGATTTAGAATTATGTCAGGCTGTTGAAGTGGAAACAAAAGCCACATATTTAGATGGGGATTTCAACCCAAGAACTTCACCGGAGGACCTTCCTGGTTTTGATTCTTCCTCTGGACATAATTATATCTACCCAGTCAATTATCCAGTGAGAGAGTACCAGTTTAAAATCATCATGAAAGcattaatgaaaaatacacTAGTTGTCTTGCCAACTGGTCTTGGAAAGACATTTATTGCTGCAGTTGTGATGTATAACTTCTACAGGTGGTACCCCCTGgggaaaatcatttttatggcACCAACAAAACCCCTTGTTGCACAACAGATTCAAGCCTGCTATAACATAACTGGCACTCCAGCTGAGGATACTGCTGAAATGACTGGAACAATTTCACCAGCAAGAAGGAAGGCATTATGGGAGAAAAAGAGAGTTTTCTTTCTTACACCACATGTGTTACAAAATGACCTTGGACGTGGTGCTTGctctgcaaatgatattgtttgccttgtttttgatGAAGCACACAAAGCCCTTGGAAATTATGCTTACTGCCAGGTTATAAAGGAGATTTCTGGAGTGAAGTCAAACTTCCGTGTCTTAGCACTTAGCGCTACTCCTGGTGGGGATATGAATGCTGTTCAGCAAGTTGTCACTAACTTGATGATATCACATGTTGAACTGCGATCTGAAGAGTCAAATGATATCAAACCATATGTTTATGGAAGAAATGTTGAGAAGATTATTGTTCCATTAAGCGAAGAACTAAAGAAAACCAAGCAACAATTTGTTCtgGTTCTTGAAGGTATTATTCAGCGACTTTGTACTCAAGGAGTGTGCTGGCAACACGATGCTACTAAAGTTTCGAAGTTTTTCTTGTTGAAAGCAAGAGATCAATTTCGCGCGCGTGGCATGGAAGACAAATCTCGCGTTGGAATGATAGAAGGTGATTTTGCATTGGCGATCTCTCTTTATCATGCGTACGAACTCCTTCAGCAGCATGGTGTTTTGTCATTTTACAATTTCCTCAAAGAAATCTGCAGCGGAACGAAAGGCACTTCGCGAGGACGCTATGAGCTGATGAGGCATGAAAAGTTTATGGAAATGATGGACGGCCTACGTCAACGCATTGAACCGCCGGATGATGTTGATGGCTCTTTGAATGGCACTTTTCTTGATGTACTGACACCAAAAAGACGTCTACTCAAGTCTATACCCAAGCCCAATTCGTTATTCTCAAGTCACCCAAAGCTAAAAAAGCTGGAAGAGATTGTTGTCAAACATTTTGAGGGGGCTAAAGAGAATCTTTGTGATCCATCCAGCCAAACTCCATTGAATACCAGAATTATGATATTCTCGCAGTATAGAGACAGCGTGCAAGAAATCACAGCAGTGCTGAGTAAGTATCAACCATTAGTTAAAGTCATGTCATTTGTTGGCCAGAATGGAACTGGGAAAGGCAACAGAGGACTCAGCCAAAAAGAGCAATTAGCGGTGGTTCAGAGGTTTAGAGAAGGAGGTTACAATGTACTTGTATCAACGTCAGTTGGAGAAGAAGGTCTCGACATTGGCGATATTGACcttattatttgttttgacgCTTCGAATTCACCGATACGATTAGTGCAAAGGATGGGGAGAACTGGTAGAAAGAGAGCTGGGAGGATTATCATTTTGGTAACGGAGGGTAAAGAAGATCAGATATATAAAAGAAGCTTAACAAACAAGAAGAGTATTCATAAGAAACTGTTAGATGCAACAAACTCGCTAGTATTGTTTGACGAAAGTCCGAGAATGATTCCAAAGCATTTGAATCCATATTGCTTGAAAATGCAGATAACTGTACAACCCCAAGTGCTTgttttatgttttttttgttttatttttagtcgTGGCGtcaagagaaaatcaattgaggaaaaaccaaagaaagtATCGCGTAAGAAGTTAGACAAGGATGCAAGCGATAAGAATCTGGACGGAGAAGTAGAAGGCAGCGAAACgaaaacttccaagaagaactcacgtaaaaaaacattgaaagagAAGAGACTTGATAAAGCGAAGGCATGGAGAAGAAGTACAATTCAAAAGACTATCGATTTATctgacgatgatggtgatttCCAATCAGAAAGAAACGATAGAGCTGTATCTGGTAAGGTGGATTTGATGAATGATCAAAGAGCACTCGATAATGTAAATCTATGTAACGTTTATGATCAAATGGaagtagaaaatatcaatGCCAACGAGAAAAGCAAGATACATGAAAGCTTGCGAGAAAACATCATTACAagtagccctgaaaatggtgaagatgatgattttatttgcACTCAAAATATAGCCTCATTTCTACCAAGTAGCACCCCAAATAGAGATTCAAGGGCTCCAAGAAATGCAGCTTTGAAATCCAATGCTCTAGATGCAGCTGTTCCACCACCGCCAGCCTGTGACGATCTAGATAATCTAGATAACATAGACGCTGATTTTAGCAGTGACGAtttgttgaataaaaatgaaaatagtagTTACAAGGGTATTGGTGGCAAGTGTGGgattgcattatcaaataaagaaaGCCATTATTATAGCAATCTCAGCAGCGGCTCAAGAAAATGGAATTCTAGTCTAAATGGCAAAAGTTTCCAAAAGGCTCATATCTTTACCCAGCCAAAAGATGCTGGCATCGATGCTTCACAAGGTTTTGGAGTTgtgaattgcaaaaataatacGAGTTTGAAGGACGTTGAACTTTCAACCTTGGACCTTTTCGGCGATAGTTTGATGGGAGATTTTGAGGATGAGTTTGAAGATTGCCCTTCACCTCCGGTTGTTTGTCAGGTGAAGACGACGGATGCAAAAGATCAGGACAAATCCATTAAGTCTAGGAGTGAATCATTTCATAGCAAGGAGCACAATGTACTTGGGGCGAAAAATGAACGTATAATGTCAGGAAACGTTGAACAAAAACTTGATTGCACGCTTGATAGATTTGATAAGACAAAAGATAGTCTGTTTGGTTCGTATAAAAACGGGACTTGTGATTTTGGTGGAATTGATAAGAACGATTCGATTGATGATATCGATCTTCGGGaattaaatgaatcaattaccTGTAATGTATCAGATGATGAAACAGGTATCAATAATGAATTGCCTGTGCTATCGCTTAGTAGCCGGCTCAAGAATCGTCGAAATTTCATCGATGAAGAAACAAACATCGAAAATGATGCTAAACTGTTCGATGAAGTTACCGGCGATTCTAATGGAGTTTTCTGCAGACGTGAATCAACAGATGCTAAAGTCTTAGCTAAGGACAATTACATACATTGTAACTCAACACAGGCAACTTCAAAAGAAGCCAATTCAAGTAGAGATTTTGATGTTGAGCAATCGCCAAGGCTGATGAAGCCATCGGTAGTATGTAGTGATAAAGTATCAGCTAGATTACCAACGTCTAGTGATGGTTCTACGAGTGACTATGAAAATCCAATGCCATCGCTTGCAACACGCTTAAAAAGTCGCAGTATTCCACTTCTAAATAACCATAAAGTACATGGTGGTCTTGGGCCTCTGAATAACGAGAAAAATGAGATTCATATCACTGATAACACAGAAACTGATCTAAATGCGGTCCGTTCTAGGCATTTGAGAAACAACCTAAATCCCACGTGCTCAGATATTAATACTGAGAATTTGAACTCTGATTCGCATTTAAAAGGAGAATCTCCTCACCTTAATAACAATCGACGCAGAAGGAAAGCTGTTGGAAGAATATTGGACGATTCCCCTTCACCAAGGAGCAGTACCATTCCAGGAAATAATAGCTCTGATGATGAATTCGAGAACTGCATTCTTAGGAGAAGGAAAACGAAAAAAGTTGGATTTTTCAAATCTCCCGCAGTGAGTATTGGGGGTGCTTCTAAGAAAAGACTGCGAACAGATTTTATTGACGATGAAGCAGAGTTGTCAGGAGACGACAGTGGAGATGAGATATATCCGGACGGGAGCCAATATGTTATGGATAGCTTTATTGATGATGCTACGCAGATGACTCAAGTGACGCCAATGCGTAACCGTGCTAAAGAATCTGTTGATATGGCCATGATTTACAGACAATCACTCTTCAGCCCTATGTATGAAGCTTTGAATTTTCACACACCTGGATTCAAAGCCAATAGAAATAGATACAAGATGGTAGGAAGGAGTTCATGGCAGCAGCAAAGGTAtAAAATTCTATCTACGGATTTGTTCGTTTTCCTtagtgatgacgatgacgaagCAGCAGAGTTAAATAGCTTCATAGACGATGGTGGTGAATTTGATGAGGACAATGATTGTGAAGACGGAAGTGAACAAGTTCCAACAAGTGATGAAGAATGTTTATCTGATGGACTTGACAACACCAAACTTCAATCTAAAAGTGACATTATCAGTCCACCGTATCGTAAAAAGAAGTCACGTTTAAAAAGGATTCTCTCTTCTGATGATGAGGAGCCAATAGTAGATGAGATGAAAAGTGAAGACAAAAATACGACAGAAATAGAAAGGCCCACACGCAAAAGTAATGGAAGTTTCGATGAAACAAACAAAGTTGAATTTACTCGAAATGGGCCGATTATGAACAAAGATTGCAGTCCATCTTCTCATTCAATGACTGCAAATGAGAAAATGGTGAATAAAAATAGGGCTTTATACTCATTGCTAATTGCTGAAGATTTTCAACCGTGTTTTGATTTCGGGTTAGACCTAGGACCAAGAGATCTACAAGTGAAGGATGAATCTCGAAAGGTTGGTTCTATTCTTCGCCTCAAACATCATGTTCAGCTCACTGTCTGCTCGCAACTTTATTGCGATTTTGTTGTTAGTAAAAGAATGGGTGTTCTGCGAAAAGTTCAGTCAGATATATCAAATGGCTCCAATAATGCAAAGACTTTATCATCCATCAAAGAAATGATGGATCATTACGGTAGAGCTTGTGTCATCATCGAAAAGGATCGTATTAAGGGATCAACCGCTGCCGAAAGGCATTTGTAA

Transcript

ENSSJYT00000014036

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IYD8	Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2
Q8BGE5	Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3
A0A1D5PRR9	Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003347 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR044749 all species →	Domain	FANCM, DEAH-box helicase domain	Interproscan
IPR039686 all species →	Domain	FANCM/Mph1-like, insert domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14025 all species →	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0000400 all species →	Molecular Function	four-way junction DNA binding	Interproscan
GO:0009378 all species →	Molecular Function	four-way junction helicase activity	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0045003 all species →	Biological Process	double-strand break repair via synthesis-dependent strand annealing	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10896	FANCM; fanconi anemia group M protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.