Gene detail

Detailed information of ENSSJYP00000013633.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: CAH3150452.1, unnamed protein product [Porites lobata]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000014229

ATGTTTACTCCGAGGAGAGACAGCTCAACTCGAGGAAGCCCGTTTTCTAGCCCATATGATCGATCAAAGTGGAGCCCATTTGTCAGTAGTGGGAGCACCAAAAGAAGTGGGAAACCACGAGGAGCTAGGCCATCCCTTGGAATCTATGAAACTGGCCTTGTTTCAGGAAAATCccATGGGTCATCATTCACTCTTGAAGAAGCATCTACGCACAGAGTAACAACCTATGGCCAAGCACTACCAGTCCAAGTAACAGAGGCATTATCCAATAGATCTTCAGcCTCAATCAGCTGCAAACTGGATCCTAGTGGATGGGCTTGGTTAGTTAGTGGAAAACAACTTCTTATATGGAAATATGTCCCTTCTGTATTGAGCAAGaatatttcTTGCTGTGAAGTATGTCTTCCGATATCAGAACTGCCTCACAAAGCCAAGTTGACCTGTGTTATACCAGCTGACTCTGGTGACAATCAGTTTGCATCAAAAGATGTATTGGCCTCTATAGTCAATGTTTCTCCAGAAGGAATTATCAGGTTTTGGCCAAACATTTCAAATCCTGGAATATTTGTAGAATCATCTGCCGGATGTAGAGGAAAAGAATTCCACATTCTGGCTCCACTTCCTCCTTATGGCTGCATTTTATTGACATCTGATGGTGAAATCCTACTCATTTCTCCAAATCAGTCCAATATCATTTGTCGATCAATCAGTGAATCTGCTGGATTATTTTCCGGTATTGGCCGTAAAATGTCGTCGTTTCTTCTTGGCAGTCAATCGTCATCATCGACTCTTATCCATACACCGATACTGGCCGTAGGACCAGGAGAAGTTCTTGCCAACGAAAGGCATTTCTACTTGCTAGCAAAcggaaatttacaaaaatgggAAATTCTAGATGGAAAAGAAAAGttgCTGTCGCAAGTTGATTTGCTGGATAAGCTCAACAACGAAATATTCAATGTCTTAGAAGTGGATCCTGATGCTCTGGTTAAGATTAAACCACTTGACATAGCATCAACAGGATACTGCATTGCTGTACTTGCTTGTGCTGTTGTTCAGATGATAAGCAGTCTTAGGGTCATATTGTTATTAGGCACAATACAGTCATCCGGCAAAGACTTCGCAAATTGCTTTGAAAGCTTGATTCCGTTGGAATATTCAACTGAAGTCACGAATGAAGCTGATATTCCTGATTTTGAGCTGTTAATTCCACCTGGAAGCTATCaggcatttattttcaataaacataTTATTACAGCTAATCCAGTATCGGAAGTGAAATCGTGCCTCGTGGAAGTGAAATTCCCGAATGATTCTGCTAAGGTTGTCGGTGGAGGCTCGTATGGCACTGATGCAGTTTTCTTATCCAGAAGACACGGACTTTTCAGTGTTGTTGCATACTACAAGGATTCCCCATCAAGTGTTCTTGAAATGGATACAAGTCATGACGCCAAAGCACTTAGGCCATCAGAACCATCGAGGGATACAACGGAACGAGGCCAAACAAAGATGGTAGACTATGCAGATGAAGACTTAAAAgatgttttgagaaaagcatTCTACAAGCATTCTGAGGGAAAATTGTTTGAAGCTACGGAAATAGTATCGATGATATCATCGGAGGAGACGCTGAACGAGGCAGTAATTGCAATTGGCAATGAAATTATCGATGCAATTCCTGCATCTGATCCGAGATGGGCTCAACATGCAGCCATTGGTAGCCAAGCAGCAACTGATTCTGTCCTTATCATGAGACAATTGAAAGATAAAGAGCGCGTTTTTGACTTCTTCCTTAAGTTTCTTAACGATGTGGAAGTCTTTGATAAGCTAACAATCTGTCGTGTAGATGGCGAAGAATACTACACAAAGTTCAAATTGTGTGAACAGGCTGAGAAACTCTGTGCAGCACAAGCGTTACAGATGATTAACTTAAGAGATGACAGTTTCGTGCAGCATGTAATTAAATCTGTTGTTGAAAAACGAATGGATGATATTCCAAGAAACCTCACTTTTCAGGATATATTTTTCAGAGAGGTTGGCAAGATTCAagaactttttgcaaatttaacaGACCACGAAGATGATGTCATTAACCAACAAACGTCAATTAAAAAACAGATTGAAATTATTATGCACGTCAACAATATACTCATTTCTGCACTGAAAGATGCGTGGTTATACAGACAAAGCAAAGcttcattttatcacccaAACATTGAAAACCTTGAAGGCATAAAATACATTCCGTGGACAGCTCAAGATGATCCAAATGGAATCAGGTCGGTGCTGAAAAAACAGATTGGAATGACGGCAGATAAAGGCTTGATAAATACTGATATTGCAACAaCAACAAAAAACCTACTGCAACAGATCGTAGATCTTTCCGACCTGcttcttgatggttatgtCACTCAATTGCAGTTTCTCAAGGCGACACAGGGCGATTGTACTCAACTTCaacttgaatttgaaaacGAGAGAAAATCTGTCATAGAACAGCTAATGGAACAAGAACATTACAAAATGGCCTTAGCACTGGCTGAAAAATACGAAGATTTCACTCTCATGATTAGCATATgcgaaaaagaagaaaatagcgaaaaaattgagaaatataaGGCGACACTTAAAGATAAAGGATTCTTAGACTTTCTGTTCAAATGGTATTTGGATAGAGGTGAGCTGGGTAAACTACTTAGTCAGGGTTCTTCGCCACAGCTTGAACGATTCTTGAGCTCGCATCATGATCTAAGTTGGCTCCACTTCATTGCAACTGGTGAATATGAAAAGGCATCGCATGTCCTAAAAAGAAGCGCAAGAAATGAGAATTCTTATCTGGCAAGGAAGAAGACAATGTTATCAATTGGGAAACTTTGCTTGCTGGCGTCGGAAGAAGACCATGATAGCATGGCGGATAATTTAGgagACATTCAAAATGAACTTGATGTTATATTGCACCAAGAGACTCTCCCGTCAACAGTCATTGAGAATTCCGATATTGATATAAACAACATGCCCCCATTTTCCGTGGAAGATTTGATTGAGCTCTACACGGGAGAAAGCAACACTGATGCGGATGAATATGACTTTAAGCGTGCTCTGGACCTTGTTAACTTTTTGgAGTCGTCAAAGAAATCATCTCTTAGGAACAAAATATGGTGTAGATGTATTCTCAGAGACAACTGGAGTGTAGGTGTTCCTGCAGATCCCGTTACAAGAGTTCAAGAAACCTTGTTCTGCAGATGTGCTCAATTATTTGATGGTGAAActtCAGACATCCAGACAGTTGTACCCTCCCTTGACGTACTGCAAAGTTGTGAAGAGTTGCAAATACACGAACTAAGTTCAAATGAGAACTTTTTATTCTTGATGAAGGCTTTCTACGAAAGTATCACCATCAGATGA

Transcript

ENSSJYT00000014229

aatggccTAACCACATTTTGCAAACTGAATCGactagattttgaaaaaagtatcTTCCAAATGTTTACTCCGAGGAGAGACAGCTCAACTCGAGGAAGCCCGTTTTCTAGCCCATATGATCGATCAAAGTGGAGCCCATTTGTCAGTAGTGGGAGCACCAAAAGAAGTGGGAAACCACGAGGAGCTAGGCCATCCCTTGGAATCTATGAAACTGGCCTTGTTTCAGGAAAATCccATGGGTCATCATTCACTCTTGAAGAAGCATCTACGCACAGAGTAACAACCTATGGCCAAGCACTACCAGTCCAAGTAACAGAGGCATTATCCAATAGATCTTCAGcCTCAATCAGCTGCAAACTGGATCCTAGTGGATGGGCTTGGTTAGTTAGTGGAAAACAACTTCTTATATGGAAATATGTCCCTTCTGTATTGAGCAAGaatatttcTTGCTGTGAAGTATGTCTTCCGATATCAGAACTGCCTCACAAAGCCAAGTTGACCTGTGTTATACCAGCTGACTCTGGTGACAATCAGTTTGCATCAAAAGATGTATTGGCCTCTATAGTCAATGTTTCTCCAGAAGGAATTATCAGGTTTTGGCCAAACATTTCAAATCCTGGAATATTTGTAGAATCATCTGCCGGATGTAGAGGAAAAGAATTCCACATTCTGGCTCCACTTCCTCCTTATGGCTGCATTTTATTGACATCTGATGGTGAAATCCTACTCATTTCTCCAAATCAGTCCAATATCATTTGTCGATCAATCAGTGAATCTGCTGGATTATTTTCCGGTATTGGCCGTAAAATGTCGTCGTTTCTTCTTGGCAGTCAATCGTCATCATCGACTCTTATCCATACACCGATACTGGCCGTAGGACCAGGAGAAGTTCTTGCCAACGAAAGGCATTTCTACTTGCTAGCAAAcggaaatttacaaaaatgggAAATTCTAGATGGAAAAGAAAAGttgCTGTCGCAAGTTGATTTGCTGGATAAGCTCAACAACGAAATATTCAATGTCTTAGAAGTGGATCCTGATGCTCTGGTTAAGATTAAACCACTTGACATAGCATCAACAGGATACTGCATTGCTGTACTTGCTTGTGCTGTTGTTCAGATGATAAGCAGTCTTAGGGTCATATTGTTATTAGGCACAATACAGTCATCCGGCAAAGACTTCGCAAATTGCTTTGAAAGCTTGATTCCGTTGGAATATTCAACTGAAGTCACGAATGAAGCTGATATTCCTGATTTTGAGCTGTTAATTCCACCTGGAAGCTATCaggcatttattttcaataaacataTTATTACAGCTAATCCAGTATCGGAAGTGAAATCGTGCCTCGTGGAAGTGAAATTCCCGAATGATTCTGCTAAGGTTGTCGGTGGAGGCTCGTATGGCACTGATGCAGTTTTCTTATCCAGAAGACACGGACTTTTCAGTGTTGTTGCATACTACAAGGATTCCCCATCAAGTGTTCTTGAAATGGATACAAGTCATGACGCCAAAGCACTTAGGCCATCAGAACCATCGAGGGATACAACGGAACGAGGCCAAACAAAGATGGTAGACTATGCAGATGAAGACTTAAAAgatgttttgagaaaagcatTCTACAAGCATTCTGAGGGAAAATTGTTTGAAGCTACGGAAATAGTATCGATGATATCATCGGAGGAGACGCTGAACGAGGCAGTAATTGCAATTGGCAATGAAATTATCGATGCAATTCCTGCATCTGATCCGAGATGGGCTCAACATGCAGCCATTGGTAGCCAAGCAGCAACTGATTCTGTCCTTATCATGAGACAATTGAAAGATAAAGAGCGCGTTTTTGACTTCTTCCTTAAGTTTCTTAACGATGTGGAAGTCTTTGATAAGCTAACAATCTGTCGTGTAGATGGCGAAGAATACTACACAAAGTTCAAATTGTGTGAACAGGCTGAGAAACTCTGTGCAGCACAAGCGTTACAGATGATTAACTTAAGAGATGACAGTTTCGTGCAGCATGTAATTAAATCTGTTGTTGAAAAACGAATGGATGATATTCCAAGAAACCTCACTTTTCAGGATATATTTTTCAGAGAGGTTGGCAAGATTCAagaactttttgcaaatttaacaGACCACGAAGATGATGTCATTAACCAACAAACGTCAATTAAAAAACAGATTGAAATTATTATGCACGTCAACAATATACTCATTTCTGCACTGAAAGATGCGTGGTTATACAGACAAAGCAAAGcttcattttatcacccaAACATTGAAAACCTTGAAGGCATAAAATACATTCCGTGGACAGCTCAAGATGATCCAAATGGAATCAGGTCGGTGCTGAAAAAACAGATTGGAATGACGGCAGATAAAGGCTTGATAAATACTGATATTGCAACAaCAACAAAAAACCTACTGCAACAGATCGTAGATCTTTCCGACCTGcttcttgatggttatgtCACTCAATTGCAGTTTCTCAAGGCGACACAGGGCGATTGTACTCAACTTCaacttgaatttgaaaacGAGAGAAAATCTGTCATAGAACAGCTAATGGAACAAGAACATTACAAAATGGCCTTAGCACTGGCTGAAAAATACGAAGATTTCACTCTCATGATTAGCATATgcgaaaaagaagaaaatagcgaaaaaattgagaaatataaGGCGACACTTAAAGATAAAGGATTCTTAGACTTTCTGTTCAAATGGTATTTGGATAGAGGTGAGCTGGGTAAACTACTTAGTCAGGGTTCTTCGCCACAGCTTGAACGATTCTTGAGCTCGCATCATGATCTAAGTTGGCTCCACTTCATTGCAACTGGTGAATATGAAAAGGCATCGCATGTCCTAAAAAGAAGCGCAAGAAATGAGAATTCTTATCTGGCAAGGAAGAAGACAATGTTATCAATTGGGAAACTTTGCTTGCTGGCGTCGGAAGAAGACCATGATAGCATGGCGGATAATTTAGgagACATTCAAAATGAACTTGATGTTATATTGCACCAAGAGACTCTCCCGTCAACAGTCATTGAGAATTCCGATATTGATATAAACAACATGCCCCCATTTTCCGTGGAAGATTTGATTGAGCTCTACACGGGAGAAAGCAACACTGATGCGGATGAATATGACTTTAAGCGTGCTCTGGACCTTGTTAACTTTTTGgAGTCGTCAAAGAAATCATCTCTTAGGAACAAAATATGGTGTAGATGTATTCTCAGAGACAACTGGAGTGTAGGTGTTCCTGCAGATCCCGTTACAAGAGTTCAAGAAACCTTGTTCTGCAGATGTGCTCAATTATTTGATGGTGAAActtCAGACATCCAGACAGTTGTACCCTCCCTTGACGTACTGCAAAGTTGTGAAGAGTTGCAAATACACGAACTAAGTTCAAATGAGAACTTTTTATTCTTGATGAAGGCTTTCTACGAAAGTATCACCATCAGATGAAAGGTATTGGTTCTTAAGGCATGACCACAGGCTAACAGTTCAGTTTTTAGACTTTTGTACTGCATGAATAAATCACTGTTTTGGCTTGATTTATAACTGTAGTTGAGCGTTCTTTGGTCTTTTTTTGTATTGCAAAACCTTTTCTatagaaatgttttattttaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F1QNV4	Nuclear pore complex protein Nup133 OS=Danio rerio OX=7955 GN=nup133 PE=2 SV=1
Q8WUM0	Nuclear pore complex protein Nup133 OS=Homo sapiens OX=9606 GN=NUP133 PE=1 SV=2
Q8R0G9	Nuclear pore complex protein Nup133 OS=Mus musculus OX=10090 GN=Nup133 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003872 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03177 all species →	Nucleoporin_C	Non-repetitive/WGA-negative nucleoporin C-terminal	Family	Interproscan
PF08801 all species →	Nucleoporin_N	Nup133 N terminal like	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007187 all species →	Domain	Nucleoporin, Nup133/Nup155-like, C-terminal	Interproscan
IPR037624 all species →	Family	Nuclear pore complex protein Nup133-like	Interproscan
IPR014908 all species →	Domain	Nucleoporin, Nup133/Nup155-like, N-terminal	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13405 all species →	NUCLEAR PORE COMPLEX PROTEIN NUP133	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000972 all species →	Biological Process	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0016973 all species →	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0017056 all species →	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0031080 all species →	Cellular Component	nuclear pore outer ring	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14300	NUP133; nuclear pore complex protein Nup133	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.