Gene detail

Detailed information of ENSSJYP00000013983.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_020627207.1, uncharacterized protein LOC110064491, partial [Orbicella faveolata]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000014608

TTTATTCAATTGTATGACTATTTAGTTGTCAGAACAATGAAGTTCAAGCACATCAACTTTTATAACTGCAATCATGTTGGAGGTGTTCTTTTTGCTGTGGAAGATTTCAACAGAAAGGGTTATCAAGACTGCCCAGAACCTGTGTCTTGCACATCGAGGTTATCTGCATGGAATGTTCCTGCCTCTCTTGTTTCAGTCAATCCTGCCTCCATTGATCAAACAGTTatcagaaaaattaaatttggaaaagataatgataattttaatcaGGCAAAGTATCTTTGTTATGATCCCAGAAAGCATACAGATCGCCAAGTTAATGAGAAAAGCCTTAAAGAGTTACAGTCAAAGCTTGCCTCCTACTCTCTTGAATCTCAGGCCTTTAATGATACATATGatatttcttgcaaatattttaaagaaatgatgGATTACTATTGTCTTTCGCACCTCTCTATCAGTGATGATGAAATTCTTGgcattgaagaaaaaactCATGGTCAATGTACTACTCTGCTGTTTCTTCTGCAAGCACAAGTCATGGCAAGCCTTATGAATAACTTGTtttttttaacaaaaagtaaTCATGTGGAGCTTACGAGAAACCATCCTTGTTTCTATCAAATCCATGCTCAAATGTTTTGCTCCGGTTTGAAAAGAGTTGACTTTGTTGTTTGGTATGGAGACCATGAATCAATATTTGTCCAATCCATTCCTTATGACGAGCAATTAATAAATTCTTGTGAGTTGAGATCTAATTCTTTTCCTTGGGTTGATAATATTGATCTGTCCAATTGTAGTATTACGGAACAAGAAAAGAAGCGCTTGATTGAATTATTAATTGAGTATCAAGATATTTTTACGCTTAAAGATTCTGATCTTGGGAGAGCCCATCGATTCACTCATAATATTGATACAGGGGACAATCCATCTTTTAGGCAACGTCCTTATAGAATTCCACAGAGCCAACTAGAAATGGTAAACGAACATATAAAAAGTATGTTAGACAAGGGTATAATTCAGGAATCTAATAGCCCATGGTGTCAACCGCTGGTTATAGTTAGTAAGAAAGATGGTTCACCGAGATTCTGTGTAGATTTTAGGAAACTGAATTCTGTCACTAGGAAGCAAATTTTTGCTATGCCACGCGTAGATGAGGTACTTGATTCTTTAGGTGACGCTTGTTACTTTACAACTCTTGATCTTGCTTCAGGCTATTGGCAAATTCCTATGGAGCCTAACGATATGgaaaaaactgcattttgTACCAGACAAGGAAATTTTGAGTTTAGGGTCATGCCTATGGGACTTGTTAACGCAAGTTACACGTTCCAAAAGATGATGCAGCTCGTCTTAAGTGGTTTGCAATGGCAAATATGCATGGTTTACTTAGATGATGTGATAGTTTATTCTAAGTCTTTTGCGCAACATCTTTTCAATCTTTGTTCTGTGTTCGATCATTTCCGATCTGAGGGTCTCAAACTTAAGCCTAAAAAGTGCCATTTTTGCATTAGGCCTAAACGGGGAAAGATCATAACAGTTAAGGACTATCCGATTCCaacaaattgcaatgaagtCCGAAGTTTTGTAGCCTTGGTTTCATATTACCGTCGTTTCGTAAAAGGCTTTGCTACTATAGCTAGTCCGCTTAATGCACTCCGCAAGAAAGGTGTTAAATTCGCTTGGTCCAATGATTGCCAAACATATCCTAATGTCAAGGAGAAATTTATGCTTTATACTGATGCAAGCAACACAGGTCTAGGTACCGTACTATCACAGACCATTGATGGTGTAGGAAAAACAATCGCATATGCAAGTAGGGGTCTAAAGGAATGTTTAGCTTTATTTGATGTCATCACTGACCACAATCCCCTTCAATGGCTTGATAATGCAAGGGATCCACATTCTAGACTCTCTCGCTGGTCGTTAACATTACAAAGCTTTGCCTACACCATAAAACATAGGCCAGGTAAATTACATGGAAGCGTCAATGCACTCTCAAGGATGCAACACCCAACTGTTTTGCAAGAAACTAATGTATATGCTATTGAATCGCCAGGTTTACAACTTAATAGAGTTAAGGAATTACAAAGTCAGGATCCTAGTCTACGAGATCTCATTGACTATTATGGAAAAAGTGTCATCCCCGAGGACTCTGTCAGTGCCCGCCGCCTAATGGCCACTGTAGACGattatgtttttgaagaaGGAGTTTTGTATCATTTAGATAAAGGTTGA

Transcript

ENSSJYT00000014608

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10394	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000010 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17919 all species →	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053134 all species →	Family	RNA-directed DNA polymerase homolog	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR041577 all species →	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24559 all species →	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSSJYP00000013983.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000013983.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.