Detailed information of ENSSJYP00000014017.1 in Catostylus mosaicus

Genomic Location: chr4:3314974...3316371
NR annotation: QBS47880.1, opsin-like protein [Tripedalia cystophora]
Species Catostylus mosaicus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O42294Rhodopsin (Fragment) OS=Abyssocottus korotneffi OX=61637 GN=rho PE=3 SV=1
Q28886Rhodopsin OS=Macaca fascicularis OX=9541 GN=RHO PE=2 SV=1
O62793Rhodopsin OS=Mesoplodon bidens OX=48745 GN=RHO PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000378 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00001
all species →		7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276
all species →		FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452
all species →		DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125
all species →		FamilyG-protein coupled receptor opsinsInterproscan
IPR001760
all species →		FamilyOpsinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240
all species →		OPSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →		Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0001750
all species →		Cellular Componentphotoreceptor outer segmentInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0007602
all species →		Biological ProcessphototransductionInterproscan
GO:0008020
all species →		Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482
all species →		Biological Processcellular response to light stimulusInterproscan
GO:0007601
all species →		Biological Processvisual perceptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000014017.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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