Detailed information of ENSSJYP00000016272.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_020622795.1, U7 snRNA-associated Sm-like protein LSm10 [Orbicella faveolata]
Species Catostylus mosaicus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q969L4U7 snRNA-associated Sm-like protein LSm10 OS=Homo sapiens OX=9606 GN=LSM10 PE=1 SV=1
Q8QZX5U7 snRNA-associated Sm-like protein LSm10 OS=Mus musculus OX=10090 GN=Lsm10 PE=1 SV=1
Q54F84Putative uncharacterized protein DDB_G0291015 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0291015 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010077 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423
all species →
LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010920
all species →
Homologous_superfamilyLSM domain superfamilyInterproscan
IPR001163
all species →
DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR052840
all species →
FamilyU7 snRNA-associated Sm-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21196
all species →
U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006398
all species →
Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0016604
all species →
Cellular Componentnuclear bodyInterproscan
GO:0071208
all species →
Molecular Functionhistone pre-mRNA DCP bindingInterproscan
GO:0071209
all species →
Molecular FunctionU7 snRNA bindingInterproscan
GO:0071254
all species →
Cellular Componentcytoplasmic U snRNP bodyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000016272.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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