Gene detail

Detailed information of ENSSJYP00000017029.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_038636471.1, fatty acyl-CoA reductase 1 isoform X1 [Scyliorhinus canicula]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000017792

TCATTGCAGTGCGGTCGATGGTTGAATTAAGCAAAggcatgaaaaagcttgagATGTTCTGTCACGTATCAACTGCTTATTCTAACTGCAACAAAGATGTCATCGAAGAGAAAGTCTACCCAGTGCCAGTTGAACCCCAGAAACTTATTGATTCACTTGAGTGGATGTCAGATGGGATGATAGCGGCAATGACACCCGCATTATTAGGGGATTACCCAAACACTTACACTTTAACAAAGGGTTTGGCTGAACATATTGTAACAACAGAAAATGGTGATATGCCTGTTACTGTTGTCAGACCATCCATTATAGCTGGTTCATATAAAGAACCAAGTCCGGGTTGGATTGATAACTATAATGGTCCAACTGGCCTCATTACAGCTGCCGGCAAGGGTATGCTGCGAACAATGATTTATTCGAGTGATGCTGTTGCAGATGTAGTGCCTGTTGATTACGTTGCTAATGCCATAGTGGCAGCCGTTTGGCATTCAGCGGTCATAAAGCCATCCGAAACGTTGGTATACAACTGCACTTCGGGAAATGTAAACCCATTTTATTGGAGAAATTTAGGAGAATATGgtcaaattgttttgaaaaagtatcCATTTGAAGAAATATTCAGAAGACCGAATTTTCAGTTTGAATCAAACAAactAGCGTACTACTATTGGCGTTACGTCAGCCATCGAATCCCAGCAGTCATTGCGGATACACTGGCGATTCTGATTGGAAGCAAACCAAGAATTTGCAGACTGTATGAAAGACTTGAAAAAGCTGTCCAATCTATGGATTTCTTTACAACGAAAGGTTGGCAGtGGACCCCTGATAACTTATTAATGCTAGCTGATGCTATTCCAGAAGACGAGAAGGAGGTTTTCCTTTTCGACATGACTACAATAAATTGGAATGAATACCTCGAAGTAATTGTTCTTGGCATCAAACAATTCTTGATAAAAGACAGCATTGATAATTTAGACAAAGCGAGATGGCAAGTTACAAGGTACCGACTAGTCCGATGGTTGTCGTGTACGATATTCTTCATCGTAACGTGTCGGGTTCTCTTCACACGATCTTTGCGTTTCCGTCAGCTATGGTTCAGGGTTGTGTTTGCAGTCTACAGAGCCTTGCGCTACGTCAACCTCGTAAGCAAGACTTGACAAACTTCAGCTGCCGTTGCGTTAAATTTTGCAGCATAAAGTTTTCAAGGACTGCATTCTTGTCTTGTCTAGTAAATCAATCGAACTCTCCGTTACATTCGCTTCACGCAGAAATATTAACCCTTTCTCCCCCGGTGACTGCACACCTATACAGTAACTTCAAAAGCGTCTGCTCAGCTTACacgggggtacaagaattcatgatattggaaataaaagtgTCCCTTCGTGAAGTTTACAAGTGGGTGAAGAATGTGTGATATTGGAACGGAAATCTTTATAGATTTTAAGAGAAGATCTTCAATGATATTGAAGGGGTTATTCTCCccctttttaaaattccatgTTCTCGGTGTCTtaacccccttgcaatctaacTAAATGCATTAGTTGCTGCAatacaactgtattatcaccgagggtgaaagggttaatagaATCATAATCactagcatcatcatcatcatcatcatggcCCTGTATTCTTTAGagagaattggttacttctgAGGAGGAGGGGCTAGTGCTTCAATAACTTTATTCGcctgtagttcaacatttgtaaggtttctttgcttcaacatcatcaattattgtgcccccttgcaatctgaccaaacgcattagttcTTTCTGTACGACTGTATtctcaccgggggtgaaagggttaatatcatcataatcataatcatcatcccaatcatcaacatcaaaaatgatattacccccttgaaatctaACCAAATTTATTAGTTGCTATTGTACAACTATATTATCAACGGGTGTGAGAGTGGTTAAGGGAAGGGGTTAGATCGTTTATTAAACCCCTTTGGGGTGCCAGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZXF5	Fatty acyl-CoA reductase 1 OS=Xenopus laevis OX=8355 GN=far1 PE=2 SV=1
Q7TNT2	Fatty acyl-CoA reductase 2 OS=Mus musculus OX=10090 GN=Far2 PE=1 SV=1
Q66H50	Fatty acyl-CoA reductase 1 OS=Rattus norvegicus OX=10116 GN=Far1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004233 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07993 all species →	NAD_binding_4	Male sterility protein	Family	Interproscan
PF03015 all species →	Sterile	Male sterility protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013120 all species →	Domain	Fatty acyl-coenzyme A reductase, NAD-binding domain	Interproscan
IPR026055 all species →	Family	Fatty acyl-CoA reductase	Interproscan
IPR033640 all species →	Domain	Fatty acyl-CoA reductase, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11011 all species →	MALE STERILITY PROTEIN 2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0035336 all species →	Biological Process	long-chain fatty-acyl-CoA metabolic process	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0080019 all species →	Molecular Function	alcohol-forming very long-chain fatty acyl-CoA reductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000017029.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.