Gene detail

Detailed information of ENSSJYP00000017029.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_038636471.1, fatty acyl-CoA reductase 1 isoform X1 [Scyliorhinus canicula]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSJYT00000017792

TCATTGCAGTGCGGTCGATGGTTGAATTAAGCAAAggcatgaaaaagcttgagATGTTCTGTCACGTATCAACTGCTTATTCTAACTGCAACAAAGATGTCATCGAAGAGAAAGTCTACCCAGTGCCAGTTGAACCCCAGAAACTTATTGATTCACTTGAGTGGATGTCAGATGGGATGATAGCGGCAATGACACCCGCATTATTAGGGGATTACCCAAACACTTACACTTTAACAAAGGGTTTGGCTGAACATATTGTAACAACAGAAAATGGTGATATGCCTGTTACTGTTGTCAGACCATCCATTATAGCTGGTTCATATAAAGAACCAAGTCCGGGTTGGATTGATAACTATAATGGTCCAACTGGCCTCATTACAGCTGCCGGCAAGGGTATGCTGCGAACAATGATTTATTCGAGTGATGCTGTTGCAGATGTAGTGCCTGTTGATTACGTTGCTAATGCCATAGTGGCAGCCGTTTGGCATTCAGCGGTCATAAAGCCATCCGAAACGTTGGTATACAACTGCACTTCGGGAAATGTAAACCCATTTTATTGGAGAAATTTAGGAGAATATGgtcaaattgttttgaaaaagtatcCATTTGAAGAAATATTCAGAAGACCGAATTTTCAGTTTGAATCAAACAAactAGCGTACTACTATTGGCGTTACGTCAGCCATCGAATCCCAGCAGTCATTGCGGATACACTGGCGATTCTGATTGGAAGCAAACCAAGAATTTGCAGACTGTATGAAAGACTTGAAAAAGCTGTCCAATCTATGGATTTCTTTACAACGAAAGGTTGGCAGtGGACCCCTGATAACTTATTAATGCTAGCTGATGCTATTCCAGAAGACGAGAAGGAGGTTTTCCTTTTCGACATGACTACAATAAATTGGAATGAATACCTCGAAGTAATTGTTCTTGGCATCAAACAATTCTTGATAAAAGACAGCATTGATAATTTAGACAAAGCGAGATGGCAAGTTACAAGGTACCGACTAGTCCGATGGTTGTCGTGTACGATATTCTTCATCGTAACGTGTCGGGTTCTCTTCACACGATCTTTGCGTTTCCGTCAGCTATGGTTCAGGGTTGTGTTTGCAGTCTACAGAGCCTTGCGCTACGTCAACCTCGTAAGCAAGACTTGACAAACTTCAGCTGCCGTTGCGTTAAATTTTGCAGCATAAAGTTTTCAAGGACTGCATTCTTGTCTTGTCTAGTAAATCAATCGAACTCTCCGTTACATTCGCTTCACGCAGAAATATTAACCCTTTCTCCCCCGGTGACTGCACACCTATACAGTAACTTCAAAAGCGTCTGCTCAGCTTACacgggggtacaagaattcatgatattggaaataaaagtgTCCCTTCGTGAAGTTTACAAGTGGGTGAAGAATGTGTGATATTGGAACGGAAATCTTTATAGATTTTAAGAGAAGATCTTCAATGATATTGAAGGGGTTATTCTCCccctttttaaaattccatgTTCTCGGTGTCTtaacccccttgcaatctaacTAAATGCATTAGTTGCTGCAatacaactgtattatcaccgagggtgaaagggttaatagaATCATAATCactagcatcatcatcatcatcatcatggcCCTGTATTCTTTAGagagaattggttacttctgAGGAGGAGGGGCTAGTGCTTCAATAACTTTATTCGcctgtagttcaacatttgtaaggtttctttgcttcaacatcatcaattattgtgcccccttgcaatctgaccaaacgcattagttcTTTCTGTACGACTGTATtctcaccgggggtgaaagggttaatatcatcataatcataatcatcatcccaatcatcaacatcaaaaatgatattacccccttgaaatctaACCAAATTTATTAGTTGCTATTGTACAACTATATTATCAACGGGTGTGAGAGTGGTTAAGGGAAGGGGTTAGATCGTTTATTAAACCCCTTTGGGGTGCCAGTT

Protein

Uniprot

Uniprot term	Description
Q7ZXF5	Fatty acyl-CoA reductase 1 OS=Xenopus laevis OX=8355 GN=far1 PE=2 SV=1
Q7TNT2	Fatty acyl-CoA reductase 2 OS=Mus musculus OX=10090 GN=Far2 PE=1 SV=1
Q66H50	Fatty acyl-CoA reductase 1 OS=Rattus norvegicus OX=10116 GN=Far1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07993	NAD_binding_4	Male sterility protein	Family	Interproscan
PF03015	Sterile	Male sterility protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013120	Domain	Fatty acyl-coenzyme A reductase, NAD-binding domain	Interproscan
IPR026055	Family	Fatty acyl-CoA reductase	Interproscan
IPR033640	Domain	Fatty acyl-CoA reductase, C-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11011	MALE STERILITY PROTEIN 2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0035336	Biological Process	long-chain fatty-acyl-CoA metabolic process	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0080019	Molecular Function	alcohol-forming very long-chain fatty acyl-CoA reductase activity	Interproscan