Gene detail

Detailed information of ENSSJYP00000017265.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: CAH3109294.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000018041

ACTTTGCAAATGGCGCCTGTTGCCTTCAACAGTGCGACCACAAATACCATTATATTTGATTGCTCCAAGAAAGAGGTTTTTTCACCAAACAATGGCTACAAGTCATGGACAAGAAAGCTCAaaacaaattggaaaattgtcatgtatGTTGTTCTTCTTACATCTGAATTTTATGAGGGTGGTGAGAATTCATTGAAGACAAACGTCAACTTCCTCCTAGAAGATTTTGGTATCATGGTTAACACAGATGCTGTCGTAAGAACAAATTATTACAAATACTTTCTTCCAAAAGAAGCCCTAGTTCCTAACGGAGTATTAAACAGAGAAATAAACAGAGCTTCCGGAAAAAAGATCCCTGGATCATCAGTTTCTGCAAGTGATGTTTCACAAGGATGTTTGAGTTTTGTGTATCCATTTGGAGCAACCCTTACTGTGGACAAAAGAGCAATATCTGTGTTATCAACTGGCAGTGTCTGCTTCCCTCTGAATCGCCCTATTTGTGCATTCCATTCTTCGAAGGTAATGATTGTACGAATTGATACAGTAGTTAGAAtacaaaatgtattttttccatttttattgcaGGATGTTATCTTAAAATGGCTCACCACGGATGACTTTCAGTTGAATAATATAGACGCAGAAGATCCAGAGataAACGACTATTACTTTATACCAGACAGTACAAAATTGAGCGAAGGGTTGAGAGTCTGCCTTCAAGAAGGAGACGAGATTGCAAGGGACTACAATCAAATGTTCCATGAGAATGTTTACTCTTTGGATACTAATTTGGTACCAGCAGTTGTACGAGCCTTCGATGAATTAAAAGTGAAGCATGAACAGTTGCAACTGATTACTCCACAGTTTGAAACTCCGTTGCCACCTCTTCAGCCAGCCGTTTTTCCACCGCAGTTCCGTGAACTTCCGCCACCAGCACTTGATCTCTTTGATTTAGACGAAGCATTCTCATCTGAAAAATCTAGACTGGCGCAGATAACAAACAAATGTAGCGATGAAGACCTTGAATATTACGTAAGAGAATGCGGTGAAATCCTTGGAGTGAACAGCAAATTGGCTCCCGAATCACGCGATGCTAAACATATATTGGAGTACATATTTGCACAAGTTGTTGAATTCAAGAAACTCAATCAGGATTTCCTATTAAGAATGGATAACGAATGCCAAAGAATTACTTTTATTCAAGTTCACTTTGCAAAGATTCAGAAGGTTGCTAGCTCGACTTTGGCTTGTGACAAGCTAGAGATAGGATCAACTTTGACATTGAATAATGGCGTTAAAATGCCAAGGTTTGGCCTTGGAGTTTATAAATCAAGCCCTGGTAcagaaacaaaacaagcaGTGAGGTGGGCTGTAAAAACTGGCTACCAAATGATAGACACAGCCGCAAGATATGCAAATGAACACGATGTTGGAGAGGTTATGAAAAAAGAGAATGCAACAAGAAGTTCACTGTTTATTGTTACTAAAGTATGGGATGATATGCATGgatatgaaaatacaatttcCTCATTAAAAAGAAGTTTGAAACATCTTGGGTTGGAATATGTTGAtctgtttttaattcattcgCCTGTTGGTGGTAAAATAGTCGAGACTTGGAAAGCAATGATAGATTTGATGAACCAAGGATACACAAGGTCTATTGGTGTCTCAAATTTTGGAATTCATCATCTTGCAGCCCTTTCAAAATACTCAAAAGTGCTACCAGCTGTTAATCAAATAGAAGTTCATCCATTTAACCAAGAAAATGCTGTTGTTTACTTTTGTAAGGAGAATGGTATCAACATAATGGCGTACTCCCCCCTCACTAGAGGACTGAAGCTAAATCACCCTGTGCTGACATCAATAGCGAAAAAACACGGGAAAACTAGCGCAAATGTTTTAATCAGATGGAGCCTGCAGAAGGATTTGATATGCATACCAAAATCTGTTAAAGAGAGGCACATTCAAGagaatcaaaatgtttttgatttcaatttagaTGCAGAGGATATAAAAAGCTTGGATTTGTTAGAAGAGAATTTCAGGACTGGCCAAGACAGACTGAATGAGAAATGGATGCCATGA

Transcript

ENSSJYT00000018041

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62559	Intraflagellar transport protein 52 homolog OS=Mus musculus OX=10090 GN=Ift52 PE=1 SV=2
Q9Y366	Intraflagellar transport protein 52 homolog OS=Homo sapiens OX=9606 GN=IFT52 PE=1 SV=3
Q4DJ07	9,11-endoperoxide prostaglandin H2 reductase OS=Trypanosoma cruzi (strain CL Brener) OX=353153 GN=Tc00.1047053511287.49 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004959 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00248 all species →	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan
PF21178 all species →	Itf52_C	Intraflagellar transport protein 52, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039975 all species →	Family	Intraflagellar transport protein 52 homolog	Interproscan
IPR036812 all species →	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan
IPR020471 all species →	Family	Aldo-keto reductase	Interproscan
IPR023210 all species →	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR018170 all species →	Conserved_site	Aldo/keto reductase, conserved site	Interproscan
IPR048643 all species →	Domain	Intraflagellar transport protein 52, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12969 all species →	NGD5/OSM-6/IFT52	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0030992 all species →	Cellular Component	intraciliary transport particle B	Interproscan
GO:0042073 all species →	Biological Process	intraciliary transport	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000017265.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.