Gene detail

Detailed information of ENSSJYP00000017420.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_032233896.2, nephrocystin-3 isoform X1 [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000018210

ATGGGCAACTCATTATCGATTTTTCGCTCGAACAAAGTGCGGAGCTCGCGAAGTAGGACAACGAACTCCGAACAAGAAGCAAGTGGGCATGATACATTTCCTATCGACCATGAAGTCCGTGTTCCTGTCGATTATCCATCGAAACAACGAAGACCATTATCGATTTCTCTAAAGTCAATTGGATCATTTCGAATCCGTAAAAATAAAGGCAATGACCAGATTAGAAAAACGACAAGTTTGCTGTCCGCTGTTTCTGTTCGCTTGGACCCAGAAGCGGAAAAACTGAGGAAAGATTTCGATCAGTACAAGACAGAGAAAGAAGGTGAAGTGGAAATGTTGACGAAGCAATGTGAAGTAACAATGAACGAAAACAGGAGGCTTAGAGGGgaattaaaaatgatgcaaaCAACCTGTATCAAACTGAAGCAAGAGAGAGACAGGGCGTTATTGGCTGAAAAAGACGCTCTTGAAAGATCTTCGGCTATTGAAGCTGAGGgttctatctatctatctataatTTACTATAAAGACAAAATTCAGCGACAGTTTAAGCTGTTTAGAGACACCAAGGCAAATGAGCTGCAGACACTGCTGAAAGAAAAGCACCAACTTGAAACACGGCTGATGAAATATATCAACATGCATGGTACAGAATCTGATAGTAATCCACATGGATTGGAGATTTTAGGTGAAGGGGGAGAGATTATAACCCAATTTAATGATGTTAGTAATATCATTGGGGCATTTGATGGTGAATCTACAGCTGATATAAGTAACCATTTGGCATTCAAAGGAGTAGACATTTTAAAGTCTTTTTTGCTACCAATAGGTGACTGGGACATTGTTGTACAAAACCTTGTCAAATCTCTCAACGCAAGCATCATGAGCATTCCAGTTAATAATGTCTATAGAGTGTATGTTGCTGCCACCCAAGATATGGAGAAACAAGTTAACATCCTGTTAAAGTTATCTACATATGTTTTAGCTACATTTATCTCCATTCCAGGCTTTTATGCCTTTTTTAAatctgaaaacattttatcaattacCAATTGGCTTCCACATTTTCTTGTTGTTACGATGTTACTTTTTTCGTTACAGTACTTTGACCAATTAAATGAGCATGTTGCGTTCGACGGCCCCGTTCAACCGTTGCTAGTGACGGGACCCACTGGATGCGGAAAATCATTCTTGCTGTCTAGATGGGTACAATCACAACAAATGGAGATGACCGACTGTTGCATACTTTCACATTTTGTTGGCTCCCCAACGACATTCAGTGCTGATGTTGTGCAAATATTGAGGCGATTTACCAACCTGGTCAGTTTGCCCTCTGTCTGCAATCCTTCGAGATTGGATGAAGATTTTCCGAAGTTTCTTGACCGTGCAATAGCGAAATATCCAAATGGTATCCTAATTGTCATCGACAATGCAGATAACCTTCAGGGGTTGGATACTTACTTGAAATGGTTGGTTGATCCGTTGCCAGTTGGCTGTCGTGTTGTCATTTCAGTGCTCTTGTTTATCTTTTTCTCGCGGAATGGCCTTGCTGAAACAGAACTCGTCCAACTAATAAACATCTCTCCACTGTTTTGGGCATCTATGCTTAGGGATTTTGGAGAAAGGATGTTTTTTACGAACTTCAATgggtttatttcatttgaaaacagacaggtGGTCAGTGCTGTTGAGAAATATTACGACATTGCAGATAATACTGAGCTTGAAAGTTCGGTGAGGGACACTTTAATAAGCTATTTCCAGTTAAAGAATATTCCTGGACAAGTTACGTTCCGGGTTGCTGATGAACTGCCTTGGCTCCTGTTGCAAAATGAGCAACTTGAAGCATTGAAACAAGTTATAAACACAATTTTTGTGTCATTGTTCTGCAGGGGTCGCTGCGCTGAATTGATCGGTTATTGGAAAGTTTTGAATCATGAAACGAGCAAGATTGGAAATTGCTATTatgatttcatcaaaatgatgGAAAATGATCCAACCTTTGGCTCTCGAGTGCCTTTGTTATATGACACACTGGGAAAATTCCTGAGAGATCTTGGCCTCTTGTCACAGGCTTTGAGACCTCTAGAACGAAGCTTAGAACTAAGAGAATCATCTTTAGACCCTGATGATCCAAGTATTGGTCAGTCGTTTCATCAACTTGGTGGATTGTATACGCAATGGAAGAAATTCAGGTACCTTCATTTTAGAATACTATTCTGTAAACATGTAGGCTTTTTGATGTATAGGTCGTATTCTATCGTAATTTCTTCTACTTTCAGAGCCACTGCTGCGGAGCCTTTGCGAAAGAGATCGttgcaaatcaatcaaaaatggcAGCGACAGCTATCAGCTAATTCATCAATGAAAGTGCTGAACAGATGTGCGGAGGAAATTTTCAATCTCTCCAGTAAAAACAATTCTGCAGATATTGGAAAATTCATGAATGATCTTGGagtattgtttttcattcaaaataactACAGCATCGCTAGATCATTTTTCGTCCGTGCTCTTGAAATGAGAGAGTCCATATTTGGCCAAGATCACCCGGATGTAGCTCAGTCTTTGCACAACCTTGCAGCATTGTACAATGACGAGAAATCTGTTCAGTCCACATTGAGACATCTTGCTGGACTGTACCGAAAACAGGTAATTCTTGTTATGTTCGATCTAGAAATGGAAATATTAGAGATCCGGGAGAAGACTCTTGGGGACCAGCATCCCGCAGTTGCTTCAGCTGTTAACAATTTAGCTGTTTTGCTTTGCCAAATGAACAAACATGAAGAAGCATTGCCTCTTTTTGAAAGAGCTGTTAAAATTTATGAGGAGCATGTTGGTATACAGCACCCTAGAGTTTCAGAAATATTGCAGAATATGGCTAAACTGTATCTTGATGCGGATATGAAGACCAAAGACGTAGGATCGAGGCGGTCCTCGTTTTCATCGATTGTTCGAATACAAAACACAAGATGA

Transcript

ENSSJYT00000018210

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0CI65	Nephrocystin-3 OS=Danio rerio OX=7955 GN=nphp3 PE=3 SV=1
Q7Z494	Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1
Q7TNH6	Nephrocystin-3 OS=Mus musculus OX=10090 GN=Nphp3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003647 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13401 all species →	AAA_22	AAA domain	Domain	Interproscan
PF13374 all species →	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR049945 all species →	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan
IPR051787 all species →	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02605	ORC3; origin recognition complex subunit 3	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.