Genomic Location: not available for this species
NR annotation: XP_047131119.1, uncharacterized protein LOC100214647 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000018562 |
| Transcript |
| ENSSJYT00000018562 |
| Protein |
| ENSSJYP00000017737.1 |
| UniProt accession | Description |
|---|---|
| Q7SIB3 | Collagen alpha-2(IV) chain (Fragment) OS=Bos taurus OX=9913 GN=COL4A2 PE=1 SV=1 |
| P17140 | Collagen alpha-2(IV) chain OS=Caenorhabditis elegans OX=6239 GN=let-2 PE=1 SV=2 |
| P27393 | Collagen alpha-2(IV) chain OS=Ascaris suum OX=6253 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001899 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01413 all species → | C4 | C-terminal tandem repeated domain in type 4 procollagen | Domain | Interproscan |
| PF00092 all species → | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR001442 all species → | Domain | Collagen IV, non-collagenous | Interproscan |
| IPR016187 all species → | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR036954 all species → | Homologous_superfamily | Collagen IV, non-collagenous domain superfamily | Interproscan |
| IPR050149 all species → | Family | Collagen superfamily | Interproscan |
| IPR002035 all species → | Domain | von Willebrand factor, type A | Interproscan |
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 all species → | COLLAGEN ALPHA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005201 all species → | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005581 all species → | Cellular Component | collagen trimer | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0030020 all species → | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 all species → | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 all species → | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 all species → | Cellular Component | collagen-containing extracellular matrix | Interproscan |
ENSSJYP00000017737.1.
