Gene detail

Detailed information of ENSSJYP00000018087.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_020630613.1, ribonuclease H1-like [Orbicella faveolata]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60930	Ribonuclease H1 OS=Homo sapiens OX=9606 GN=RNASEH1 PE=1 SV=2
Q5BK46	Ribonuclease H1 OS=Rattus norvegicus OX=10116 GN=Rnaseh1 PE=2 SV=1
O70338	Ribonuclease H1 OS=Mus musculus OX=10090 GN=Rnaseh1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004905 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00075 all species →	RNase_H	RNase H	Domain	Interproscan
PF01693 all species →	Cauli_VI	Caulimovirus viroplasmin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009027 all species →	Homologous_superfamily	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Interproscan
IPR002156 all species →	Domain	Ribonuclease H domain	Interproscan
IPR011320 all species →	Domain	Ribonuclease H1, N-terminal	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR017067 all species →	Family	Ribonuclease H1, eukaryote	Interproscan
IPR050092 all species →	Family	Ribonuclease H	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR037056 all species →	Homologous_superfamily	Ribonuclease H1, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10642 all species →	RIBONUCLEASE H1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0043137 all species →	Biological Process	DNA replication, removal of RNA primer	Interproscan
GO:0090502 all species →	Biological Process	obsolete RNA phosphodiester bond hydrolysis, endonucleolytic	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000018087.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.