Detailed information of ENSSJYP00000018334.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: EDO34165.1, predicted protein, partial [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P29400Collagen alpha-5(IV) chain OS=Homo sapiens OX=9606 GN=COL4A5 PE=1 SV=2
Q28247Collagen alpha-5(IV) chain OS=Canis lupus familiaris OX=9615 GN=COL4A5 PE=2 SV=2
Q7SIB2Collagen alpha-1(IV) chain OS=Bos taurus OX=9913 GN=COL4A1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001899 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01413
all species →
C4C-terminal tandem repeated domain in type 4 procollagenDomainInterproscan
PF01391
all species →
CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR050938
all species →
FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR001442
all species →
DomainCollagen IV, non-collagenousInterproscan
IPR036954
all species →
Homologous_superfamilyCollagen IV, non-collagenous domain superfamilyInterproscan
IPR008160
all species →
RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456
all species →
SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005201
all species →
Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005581
all species →
Cellular Componentcollagen trimerInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06237COL4A; collagen type IV alpha-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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