Genomic Location: not available for this species
NR annotation: EDO34165.1, predicted protein, partial [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000019190 |
| Transcript |
| ENSSJYT00000019190 |
| Protein |
| ENSSJYP00000018334.1 |
| UniProt accession | Description |
|---|---|
| P29400 | Collagen alpha-5(IV) chain OS=Homo sapiens OX=9606 GN=COL4A5 PE=1 SV=2 |
| Q28247 | Collagen alpha-5(IV) chain OS=Canis lupus familiaris OX=9615 GN=COL4A5 PE=2 SV=2 |
| Q7SIB2 | Collagen alpha-1(IV) chain OS=Bos taurus OX=9913 GN=COL4A1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001899 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01413 all species → | C4 | C-terminal tandem repeated domain in type 4 procollagen | Domain | Interproscan |
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016187 all species → | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR050938 all species → | Family | Collagen and Collagen-like Structural Proteins | Interproscan |
| IPR001442 all species → | Domain | Collagen IV, non-collagenous | Interproscan |
| IPR036954 all species → | Homologous_superfamily | Collagen IV, non-collagenous domain superfamily | Interproscan |
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37456 all species → | SI:CH211-266K2.1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005201 all species → | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005581 all species → | Cellular Component | collagen trimer | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06237 | COL4A; collagen type IV alpha | - | Glycosaminoglycan binding proteins | ko00536 | deepkoala |