Gene detail

Detailed information of ENSSJYP00000018453.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_046863286.1, histone-lysine N-methyltransferase PRDM9-like [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSJYT00000019309

ATGTGCCATAATCTGCAAACTGGCCAGGGCCctggtttcatttcatttcatctcatttctgATCTGGAATTACCCCTACACGGAACTCTGAGAGGGTTTGAGAAACTTGACTCTAATGGATCAAGAAACACAAAAGCTCGAGCTTCATTGCCTGAAGGATTTGAAATAAGAGAATCTGGAATGATTCCAGGCAGAGATGGTGTCTTCGCATTGATGCCAGTTTTTCTTAATACCCGATTTGGACCTTATGAAGGGCAACAGGTTGAAATGGCTGCTATTAATGATGGAAAGGACATAACGCACATGTGGGAGGTGAATGATGTGTCATACTTTATTGATGGCAGTGATGAAAACTTTGCTAACTGGATGAAATTTGTGAACTGTGCAAAAACGAAATCAGAACAAAATATGGTTGCATATCAATATGATAAAGAAATCTATTATCGAGTTTGTAAGAAAATCAACGTTGGTGACGAATTGTTAGTTTGGTACTCAGATGGCTATGACGATGAGGCAGGCTCTGAAAGCAAAGCTCATGAGAAATATTTCGGAAACGTTTCCACAAAAGACGTGAGGAATGGCAAAACTTTAGCGAATCGTTCGCAAAAACGACCTCAAACTATTCGCAATGTTACAGATGATGCTGAGGTATCGCAAAATAACTGCAATATTCGCGAAGGAGACACTGAGCGATCACGAAAAGCCCGCgaaattggcaaaaaagctCGATTGCAGCGTATACGAGTTAAATTGAAGGCGTCAACATATTGCGATATCTGTAAGAAGAACTTTACGACCGCTACATCGCTCGTAACACACTTGCGAATTCACACGGGCGAAAGACCATACGTTTGCGAGATTTGCGGCAAAGCTTTCAAGCAATCAGGCCCTTTGACATTGCATAAAAGAACGCACAGCGGGGAGCGGCCTTACGAGTGTGAAACATGCCAAAAGAGGTTCTTGTCTTCCTCAAGTCTAGCTAGGCACAAGCTCACCCATGGTTCTGTGAAGGAGCATCCATGTGACATTTGTAGCAAGAGGTTTTCGACCAAGGCGGATTTGAGAAATCACGTGCGGATTCACACGGGCGAAAAACCGTTCGAGTGTGACGTTTGCGGGCGGAGATTCGCGCAATCGTGCAACCTGAAGACACATAAACGGTCGCATTCCAAGGAAAAAGAGTATTCGTGTAACGTGTGCGGCAAATCTTTCCGTGAGCACATAGCGCTGATAAATCATATAGCAATGCACGCGGGAGAAACGGCATTCGCTTGCAACGTTTGCAGCATGGAATTTTCGCAGGCGTATAGCTTACACAAGCACATGTTCTCGCATTCGAAGCAGAGCGGGTTCTATTGCGATACGTGCGGCAAGATTTTCAAGTCAGAGTTTCGCCTAGCTGCTCACCAGTCAAGCCATTTGGCCAAGGAAAGCCACGTCTGCGGTGTCTGTGGCaaagattttcttttcagaGCAAGCCTAGCGGCACACGCGAGGATCCACAGCGACAAGAAACCGTATGTTTGCGACACGTGCGGTAAAGCGTTCAGGGAGTCGGGCTCGCTAAAAATGCACGTGCGGTTGCATACGGGAGAGAAACCTTTTGTTTGTGAGCTCTGCGGAAAAAGCTTCAGCCAATCAGGCCCCTTAACTCTGCATATGCGTACGCACACGGGGGAACGGCCGTTTGTTTGCGATATTTGCGAGTGTCGCTTTAGATCATCATGTAACCTTAAGCGGCACAAGCTCACGCATACGGGTGATAAACCTTTTTCGTGCGGCCAGTGCGGGAAGCGGTTTGCTACGTGTACCGGGTTGTCTCAGCACGAACGCGTGCATTCCGGCGAGAAGCCGTTCGTGTGCGATGTCTGCGGAAAGCGTTTTGCGCAGTCTTCTAACCTCAAGAAGCATACACTTGTTCATTCTAGTGACAAGCCGCACCGCTGCGACCTTTGCGGGAAAGAATTCCGTCACAAATGTAGCCTAACGACTCACATGCGGAGCCACACGGGTGAAAAACCGCACGTGTGCGACGTTTGCGGTAAATGTTACAGTCAACCGGCGACGCTTTCAAGGCATAAAGTTATTCATAATAAATAA

Transcript

ENSSJYT00000019309

Protein

Uniprot

Gene family

Uniprot term	Description
Q96EQ9	Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX=10090 GN=Prdm9 PE=1 SV=2
P0C6Y7	Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1
Q9NQV7	Histone-lysine N-methyltransferase PRDM9 OS=Homo sapiens OX=9606 GN=PRDM9 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF21549	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001214	Domain	SET domain	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR050752	Family	C2H2-type zinc-finger domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24384	FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan