Gene detail

Detailed information of ENSSJYP00000018555.1 in Catostylus mosaicus

Genomic Location: chr17:6512312...6516329
NR annotation: no NCBI-NR hit recorded
Species Catostylus mosaicus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005771 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00020 all species →	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052493 all species →	Family	Tumor necrosis factor receptor superfamily member 1A	Interproscan
IPR001368 all species →	Domain	TNFR/NGFR cysteine-rich region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46861 all species →	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 1A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005031 all species →	Molecular Function	tumor necrosis factor receptor activity	Interproscan
GO:0006954 all species →	Biological Process	inflammatory response	Interproscan
GO:0043120 all species →	Molecular Function	tumor necrosis factor binding	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0045121 all species →	Cellular Component	membrane raft	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000018555.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.