Gene detail

Detailed information of ENSSJYP00000018679.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_048576196.1, DNA-dependent protein kinase catalytic subunit isoform X3 [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000019535

ATGAAGAAAATCAAGCGAAAACTGAAAGAAATTCATTGtTCTACTTCTGATGATCttgatgaaatgattgatACTGAGCAAGCAAAGTACCTCCTTAAAATTGCTGAGGTTGCAAGGAAACAGGGAAACTACTCACTTGCATCAAGGTATTTGCGCGAATCATACGACTCCACAATGAAGGAGCAAGCATTGGAAAATGGACTCTCTCTAAACTGGTATCATGTTTATGCTAATGTCAATCGCTACAAGGCAAGAAAATTACGTATTTCCGAGGCAGTACCTACCTTAGTTACTATCTTGGAGCAGTTGCATACTATGGAtacgattgctaagaaacaaCTGGTTTGGGAAGTTGAACATGCTCTGCATAAAAGTGCTACCTTTGACTGCATAGTGGACATGATTTATGACGCAGAAATACTGGATTTCAACGCCGTTATCGGTAACAAAGAGAAAGTTGTGATCCAAACGTTTTATGGATCAGTGCCACAAATGCAGAAAGATGCTTTTTTAGGTTTCGCTAACCAATGCTCGTACAACTACCTGAATTCTGCTGTTACCTTATCAAACCGGCTAAGTGAAGATTTGCCTGAAAATAGGAACGTAATTGAAAAGACgttgatgaaaatggtgaACTTTTGCGATAAACACTtaaaagacagtgaagaaaATGAAACAGGAGTTGCACAAGAATCTGAGTATGCAGATATCATTGTACGCTACATGATAAAAGCATTAACTTTAGATTCAAAAGATGCTCGTCTAAGGTTTCCAAGACTTCTGCAAATCCTTGATCGTTATCCAGAGACCACACCAGCATTTGCCAATAAGGTTGTTCAAGTACCAACATGGATGTTTTTAGCATGGCTTAACCAGATTGTTGCACAGGTTGACAAAGCTGATGCAGATGCCATTTTCccaattttatcaaacattgCCAAAGAGTATCCACAGGCTTTGATTCACCCTTTACGCATTAGCAGTGATCGATTTTCTTTTCCCGATTCTCCACAGGGAAAACATAAGAAAAATGAGATAGCAAGATTGTTGGACATCATCAATAATCCAATGTGCGACGAATTCATTGAAGCACTCGACCAACTTTCAAATCCGAAGAGTATTCTCAAGGATTGGAGTGGTGAAATGTTAAAACTTCTACAAGTCAAACGAAGAGATTTGAATCAAATAAGAAGATGTTTTGCTTTTGTGTGGAAGAGACTTTTTGAGCCAGTTGAGCGCCATGACAGAATCAGGGGAGAGGTCCGAAGACGATGTTCCAAGGAATTGTTAAAGTCAGTTGAAAATTATTTCGACAAAGATGGTTCCAAGATTGTTGATATGCCTGTCaagGATTTCAAGGCAAAATTTGGTAAACTTGCAAAGGAGCtagagaaaattgaaagaacgGCGTATAATTTGAAGGATTATTCACCGTGGTTTTCTACATTCCACAGAATTCGTAGAGACACTTTTATCGAAGTTCCagGGCAATACACTGGTAATCAAAAGCCGTTGCCAGAGTATCATGTTCACATTGCTGGCTTTGACGAAAGAGTGCTCGTTCTAAATTCACTTAGACAACCCAAACGGATTACAATAAGAGGACACAACGAGAAAGAATACTTGTTTCTCGTGAAAGGAGGTGAAGATTTAAGGCTGGATCAAAGAATTGAACAGgTGTTTGAAATCATGAATGGAATTCTCGCCAAAGATGCAACCTGCAGCTCCAAGGCTTTAAGGCTAAAAACGTATCAAGTTATTCCTTTAACGACGAGAATTGGCATAattgaatggatgaataaCACAGTCTCATTTGGTGATTTTGTCAAAGGTGTATACACAGAGGAAGAGAGAGATTTCGTTAAAAAAAGTCCTCCCTTTTTGAAGTACAAACAATTTATCAGTCGTTACGGCTCGAATGGAAGCGACCCGAAGACTTTGTTTAGGAGTATGTTCAAAAATGCCTCCCGCACGGAAGTTGTGACATCTTTCGAACAAATACAGGCAATGATACCTTGGGACCTTCTAAGGCGAGCTTTCGACCGCTTATCAGCATCAACCGAGGCATATTTTGTGTTGCGGAATCATTTTATTCTTAGTCACTCCTGTTTGTGTATATGTCAATACATACTTGGAATTGGAGACCGCCATCCATTCAACTTAATGGTTAGCAAGACCAACGGTGGAATGATAGGGATTGACTTCGGTTATTCTTTTGGAGTTTCAACAATTatgtTACCTGTACCAGAGCTGATGCCTTTTCGATTGACTAGACAGTTCAGAAACTTGCTTTTGCCTCTCAAAGATCTAGGGCcttacagaattccaatgacaGATGTTTTGCGTGCTCTCCGACTTGATTCCGATTTATTGCTGAATACAATGGATGTATTTGTGCATGAACCACTTATTGACTGGGagGTAAATGCTCAAAATCAGACGGCGAAATTAGATAATGAAGACACATCGGCGAACTGGtatccaaaagaaaaaatatcaatctgcaaacaaaaattgaaaggtGTAAATTGTGCTTTTATCACAGGtGAAGAGCTTCGACTTCGTTGTGGCAAAAGCTCTGCTCTCAAAGACCTTCAAGCCGTAGCTTTTGGTaattttcaatacaataccaGAATGAAAAAACTGGAAGAAGCTAAAAACCATGGCGGCTCATCCAAATACTATTTGCAACCGGAAGAGCAGGCTGTTTGTCTCATCGACCAAGCGACTGATCTCAATCTTCTTGGAAGGACATATTGGGGATGGGAGCCTTTTCTGTAA

Transcript

ENSSJYT00000019535

AGGTGCACCTATATGAAGAAAATCAAGCGAAAACTGAAAGAAATTCATTGtTCTACTTCTGATGATCttgatgaaatgattgatACTGAGCAAGCAAAGTACCTCCTTAAAATTGCTGAGGTTGCAAGGAAACAGGGAAACTACTCACTTGCATCAAGGTATTTGCGCGAATCATACGACTCCACAATGAAGGAGCAAGCATTGGAAAATGGACTCTCTCTAAACTGGTATCATGTTTATGCTAATGTCAATCGCTACAAGGCAAGAAAATTACGTATTTCCGAGGCAGTACCTACCTTAGTTACTATCTTGGAGCAGTTGCATACTATGGAtacgattgctaagaaacaaCTGGTTTGGGAAGTTGAACATGCTCTGCATAAAAGTGCTACCTTTGACTGCATAGTGGACATGATTTATGACGCAGAAATACTGGATTTCAACGCCGTTATCGGTAACAAAGAGAAAGTTGTGATCCAAACGTTTTATGGATCAGTGCCACAAATGCAGAAAGATGCTTTTTTAGGTTTCGCTAACCAATGCTCGTACAACTACCTGAATTCTGCTGTTACCTTATCAAACCGGCTAAGTGAAGATTTGCCTGAAAATAGGAACGTAATTGAAAAGACgttgatgaaaatggtgaACTTTTGCGATAAACACTtaaaagacagtgaagaaaATGAAACAGGAGTTGCACAAGAATCTGAGTATGCAGATATCATTGTACGCTACATGATAAAAGCATTAACTTTAGATTCAAAAGATGCTCGTCTAAGGTTTCCAAGACTTCTGCAAATCCTTGATCGTTATCCAGAGACCACACCAGCATTTGCCAATAAGGTTGTTCAAGTACCAACATGGATGTTTTTAGCATGGCTTAACCAGATTGTTGCACAGGTTGACAAAGCTGATGCAGATGCCATTTTCccaattttatcaaacattgCCAAAGAGTATCCACAGGCTTTGATTCACCCTTTACGCATTAGCAGTGATCGATTTTCTTTTCCCGATTCTCCACAGGGAAAACATAAGAAAAATGAGATAGCAAGATTGTTGGACATCATCAATAATCCAATGTGCGACGAATTCATTGAAGCACTCGACCAACTTTCAAATCCGAAGAGTATTCTCAAGGATTGGAGTGGTGAAATGTTAAAACTTCTACAAGTCAAACGAAGAGATTTGAATCAAATAAGAAGATGTTTTGCTTTTGTGTGGAAGAGACTTTTTGAGCCAGTTGAGCGCCATGACAGAATCAGGGGAGAGGTCCGAAGACGATGTTCCAAGGAATTGTTAAAGTCAGTTGAAAATTATTTCGACAAAGATGGTTCCAAGATTGTTGATATGCCTGTCaagGATTTCAAGGCAAAATTTGGTAAACTTGCAAAGGAGCtagagaaaattgaaagaacgGCGTATAATTTGAAGGATTATTCACCGTGGTTTTCTACATTCCACAGAATTCGTAGAGACACTTTTATCGAAGTTCCagGGCAATACACTGGTAATCAAAAGCCGTTGCCAGAGTATCATGTTCACATTGCTGGCTTTGACGAAAGAGTGCTCGTTCTAAATTCACTTAGACAACCCAAACGGATTACAATAAGAGGACACAACGAGAAAGAATACTTGTTTCTCGTGAAAGGAGGTGAAGATTTAAGGCTGGATCAAAGAATTGAACAGgTGTTTGAAATCATGAATGGAATTCTCGCCAAAGATGCAACCTGCAGCTCCAAGGCTTTAAGGCTAAAAACGTATCAAGTTATTCCTTTAACGACGAGAATTGGCATAattgaatggatgaataaCACAGTCTCATTTGGTGATTTTGTCAAAGGTGTATACACAGAGGAAGAGAGAGATTTCGTTAAAAAAAGTCCTCCCTTTTTGAAGTACAAACAATTTATCAGTCGTTACGGCTCGAATGGAAGCGACCCGAAGACTTTGTTTAGGAGTATGTTCAAAAATGCCTCCCGCACGGAAGTTGTGACATCTTTCGAACAAATACAGGCAATGATACCTTGGGACCTTCTAAGGCGAGCTTTCGACCGCTTATCAGCATCAACCGAGGCATATTTTGTGTTGCGGAATCATTTTATTCTTAGTCACTCCTGTTTGTGTATATGTCAATACATACTTGGAATTGGAGACCGCCATCCATTCAACTTAATGGTTAGCAAGACCAACGGTGGAATGATAGGGATTGACTTCGGTTATTCTTTTGGAGTTTCAACAATTatgtTACCTGTACCAGAGCTGATGCCTTTTCGATTGACTAGACAGTTCAGAAACTTGCTTTTGCCTCTCAAAGATCTAGGGCcttacagaattccaatgacaGATGTTTTGCGTGCTCTCCGACTTGATTCCGATTTATTGCTGAATACAATGGATGTATTTGTGCATGAACCACTTATTGACTGGGagGTAAATGCTCAAAATCAGACGGCGAAATTAGATAATGAAGACACATCGGCGAACTGGtatccaaaagaaaaaatatcaatctgcaaacaaaaattgaaaggtGTAAATTGTGCTTTTATCACAGGtGAAGAGCTTCGACTTCGTTGTGGCAAAAGCTCTGCTCTCAAAGACCTTCAAGCCGTAGCTTTTGGTaattttcaatacaataccaGAATGAAAAAACTGGAAGAAGCTAAAAACCATGGCGGCTCATCCAAATACTATTTGCAACCGGAAGAGCAGGCTGTTTGTCTCATCGACCAAGCGACTGATCTCAATCTTCTTGGAAGGACATATTGGGGATGGGAGCCTTTTCTGTAAACTGTCAgctcttaattttttatactGGCATCGGAgtcaattgatgttttttgtaCTTGAAACATTTCCAGCAATTATAGTGCGTTGTATTCTTAtatgcttttttttaaatggaaCTCTTTATGCTCTAACCTTTAAAAGCGTGAGTTATTTTGCTAACGGCATTACTTTTTTGTATCAGAATTAATGATGGTATCAATGAACCTCGTTGCAGGGGGTAACCCGAAGCCTAGGTAGTGATGATGCTATAGTTTGCAGTAACCTTCAAGAAGATCCTTTCAAACGTGTCGATGATTGTGCTTCTCTGACGCACGGCAGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P78527	DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3
Q8QGX4	DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
Q9DEI1	DNA-dependent protein kinase catalytic subunit OS=Xenopus laevis OX=8355 GN=prkdc PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001506 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02260 all species →	FATC	FATC domain	Family	Interproscan
PF00454 all species →	PI3_PI4_kinase	Phosphatidylinositol 3- and 4-kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036940 all species →	Homologous_superfamily	Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily	Interproscan
IPR014009 all species →	Domain	PIK-related kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003152 all species →	Domain	FATC domain	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan
IPR037706 all species →	Domain	DNA-dependent protein kinase catalytic subunit, catalytic domain	Interproscan
IPR000403 all species →	Domain	Phosphatidylinositol 3-/4-kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004677 all species →	Molecular Function	DNA-dependent protein kinase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000018679.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.