Gene detail

Detailed information of ENSSJYP00000019222.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_039366520.1, F-box only protein 27-like [Mauremys reevesii]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SX24	F-box only protein 6 OS=Bos taurus OX=9913 GN=FBXO6 PE=1 SV=1
Q9N0C8	F-box only protein 27 OS=Macaca fascicularis OX=9541 GN=FBXO27 PE=2 SV=1
Q6DIA9	F-box only protein 27 OS=Mus musculus OX=10090 GN=Fbxo27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012480 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04300 all species →	FBA	F-box associated region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039752 all species →	Family	F-box only protein	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR007397 all species →	Domain	F-box associated (FBA) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12125 all species →	F-BOX ONLY PROTEIN 6-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006516 all species →	Biological Process	glycoprotein catabolic process	Interproscan
GO:0019005 all species →	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031146 all species →	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15259	PARP7S; poly [ADP-ribose] polymerase 7/11/12/13	EC:2.4.2.30	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.