Gene detail

Detailed information of ENSSJYP00000019326.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_032220916.1, dystrobrevin beta isoform X2 [Nematostella vectensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000020203

ATGCACCCCTCAAATATGAGTCAAATGCCTTCTCCTATTTTTTCCGGAAACGGTGACAGTTTTAACTACACCTCCCATTCAGCTCGAAGTCAGGGACATTCAACATTAAGAAAGTTTCTTGCAGACTTGAgAGGCCGCAATTTTGACACAATCAAGTATGCCACATACCGAACAGCTGCCAAGCTTTTTTATATTCAGCGCTCTACCAACCTGAATTTGATAGACATCTATAACATGATCGAAGCGTTTAGAGAAAATGGTCTGAATGTGCTTGACTGCAATGCAGAAATCGACGAAGCAAGACTCGAGTGTATTATTGCCAGTGTTTTCTATGCATTATACAAGAGACTGCcatcatcaaatgaaattgatgtTGAGAATAACATTGTTAGTCTAACTCAATGGATCATGCATGCTTATGATAAGGATAATTTGGGAAGAATTCGAGTTTTATCCATTAAAACTGCACTTACCATGCTTTGCAGTGGGAGATTGATCGACAAAATGAGATacaTTTTCACCCAAATTTCGGAATCAAATGGAATCCTTATTGCATCGAAATTCGAGTCTTACCTCAAAGAACTTCTAACACTTCCAGCTGCAGTTGGGGAGGAGCCAAACTTTAGCTATGACGAAGGAGTTTCAAAGGAATTTTTCAAACCGAATGGCATCATGGACCCGCAACACACGAATCTTGAACAGTTTCTACAAGCCATGGTTGCTGAAAGAGCATCTGGGACTCTGTTCTGGCTTCACATGCTTCACAAGCTAATACGTGCATCAGCCGttgaacACAACATCCAATGCAAAGCATGTGGTAGAAAGCCTTTCAACGGGTTAAGGTACAAATGCTTGCAATGCTACAACTATCACATCTGTCAGGACTGTTTCTGGCGTGAGAAAAAGTCTGGATCACATACAGATGAACATGACGTGCGAGAATATTCAACATGgAATAAAGGAGAGAAAGGTACTTCGATCAAGCGTAGATTCCTCTGCTCACCAACCAGAAGCCTGAACAAGCTTCCTGACTACCCAAAGGAACCAGAGCCGAACAAAACACTGGATATGAGTAACATTATTCCTCCGATGCCAGCAGACCTTGCACCTCCAGTTGGTGCCATAAATAATCGTGTTTACCATGATTATGGCAGTCCAAATAGCACCCTGTCGTTCAAATGCTCAAATGGTGAAGCGTCTGGTTCCATTTCGCATGAATCCGTAGTCAGgatGGATGATGAGCACAGGTTAATTGCAAGATATGCACAGAAGTTGGCATCTGAAGCCCAGACAGATGCGAGTAGCTCCAGTGGTGAGTTATCTAAAGAGCAGCGTgatatgatttcaaatttggAGGAAAAAAATCGTTCATTGCTACGTGAAATACGAAAGCTGAAATTGGAACATGATCAAACTGTGAAGAATGCCCAGCAAGTCGGCAGCAGCCCTAATGTCCTTTCAGAGTTAAAAATTCTTCGACAGCGGAAGGACGAGTTAGAGATGCGAATGTCGGCGTTACAAGAAACTCGCCGTGAACTGATGGTTCAGTTGGAAGGCCTGATGAAGCTTCTAAAGAAGAACCAGTCATCTCCGCGTGGCCTACAACGCAACCCGTCGCTGCGCGAAACCGCAGAGTGGGCGCGCAGCTGCCAAAATCATTCACCAACGCATTCACACCAACCATCAGGCTCACTAAGTGGTGTCGACGGTGATGTTAAGCTTGCATTCGGCAAGCCGCAAGGTCCAGAAATGGTTGGTAGAAATCTGAGGGCGGACTTGCTGCATGCAGTTGATGACATAACGTCAGCTATGTCAGTTCTCGTTGATGAACTCAGCAAAGATGAAATCGACGACTGTGAACAGCCTGCAGATGCACCTGTTCAATCCTCCAGTCAGAAGTACGAACAGTTGACACGTGATCTTGATTTGATCATGAATGAGCTATCTGCAACCCAAGTCAGCCAAGATGTTGCTGTTGCTGAGATGAGAAATCCCGTCATCAGTTACTGA

Transcript

ENSSJYT00000020203

TTCTTTTGGCTgcagaaactcagtactgaagcTTATGAACTATTTGAGGAGACCCCTCTTGTATAAACGCGTtttatgattgattgagtgatttggtttgattcaATATTGATTCATTTGATTCAATGCGCAATCAGCTGTGATTCTGCTCCGCCCGCCAACCTATTGAACTGACAAGTGAACAGCTCTGGTATCACAAACACGTCTGTTTTCGTTTCAATACAATTACTCTTTCTCTCAATCAAACAGTTTAAAGAACATCTGGTAAAGTGTGGGATGTATTGTGAACAGAAACTGAAATGCACCCCTCAAATATGAGTCAAATGCCTTCTCCTATTTTTTCCGGAAACGGTGACAGTTTTAACTACACCTCCCATTCAGCTCGAAGTCAGGGACATTCAACATTAAGAAAGTTTCTTGCAGACTTGAgAGGCCGCAATTTTGACACAATCAAGTATGCCACATACCGAACAGCTGCCAAGCTTTTTTATATTCAGCGCTCTACCAACCTGAATTTGATAGACATCTATAACATGATCGAAGCGTTTAGAGAAAATGGTCTGAATGTGCTTGACTGCAATGCAGAAATCGACGAAGCAAGACTCGAGTGTATTATTGCCAGTGTTTTCTATGCATTATACAAGAGACTGCcatcatcaaatgaaattgatgtTGAGAATAACATTGTTAGTCTAACTCAATGGATCATGCATGCTTATGATAAGGATAATTTGGGAAGAATTCGAGTTTTATCCATTAAAACTGCACTTACCATGCTTTGCAGTGGGAGATTGATCGACAAAATGAGATacaTTTTCACCCAAATTTCGGAATCAAATGGAATCCTTATTGCATCGAAATTCGAGTCTTACCTCAAAGAACTTCTAACACTTCCAGCTGCAGTTGGGGAGGAGCCAAACTTTAGCTATGACGAAGGAGTTTCAAAGGAATTTTTCAAACCGAATGGCATCATGGACCCGCAACACACGAATCTTGAACAGTTTCTACAAGCCATGGTTGCTGAAAGAGCATCTGGGACTCTGTTCTGGCTTCACATGCTTCACAAGCTAATACGTGCATCAGCCGttgaacACAACATCCAATGCAAAGCATGTGGTAGAAAGCCTTTCAACGGGTTAAGGTACAAATGCTTGCAATGCTACAACTATCACATCTGTCAGGACTGTTTCTGGCGTGAGAAAAAGTCTGGATCACATACAGATGAACATGACGTGCGAGAATATTCAACATGgAATAAAGGAGAGAAAGGTACTTCGATCAAGCGTAGATTCCTCTGCTCACCAACCAGAAGCCTGAACAAGCTTCCTGACTACCCAAAGGAACCAGAGCCGAACAAAACACTGGATATGAGTAACATTATTCCTCCGATGCCAGCAGACCTTGCACCTCCAGTTGGTGCCATAAATAATCGTGTTTACCATGATTATGGCAGTCCAAATAGCACCCTGTCGTTCAAATGCTCAAATGGTGAAGCGTCTGGTTCCATTTCGCATGAATCCGTAGTCAGgatGGATGATGAGCACAGGTTAATTGCAAGATATGCACAGAAGTTGGCATCTGAAGCCCAGACAGATGCGAGTAGCTCCAGTGGTGAGTTATCTAAAGAGCAGCGTgatatgatttcaaatttggAGGAAAAAAATCGTTCATTGCTACGTGAAATACGAAAGCTGAAATTGGAACATGATCAAACTGTGAAGAATGCCCAGCAAGTCGGCAGCAGCCCTAATGTCCTTTCAGAGTTAAAAATTCTTCGACAGCGGAAGGACGAGTTAGAGATGCGAATGTCGGCGTTACAAGAAACTCGCCGTGAACTGATGGTTCAGTTGGAAGGCCTGATGAAGCTTCTAAAGAAGAACCAGTCATCTCCGCGTGGCCTACAACGCAACCCGTCGCTGCGCGAAACCGCAGAGTGGGCGCGCAGCTGCCAAAATCATTCACCAACGCATTCACACCAACCATCAGGCTCACTAAGTGGTGTCGACGGTGATGTTAAGCTTGCATTCGGCAAGCCGCAAGGTCCAGAAATGGTTGGTAGAAATCTGAGGGCGGACTTGCTGCATGCAGTTGATGACATAACGTCAGCTATGTCAGTTCTCGTTGATGAACTCAGCAAAGATGAAATCGACGACTGTGAACAGCCTGCAGATGCACCTGTTCAATCCTCCAGTCAGAAGTACGAACAGTTGACACGTGATCTTGATTTGATCATGAATGAGCTATCTGCAACCCAAGTCAGCCAAGATGTTGCTGTTGCTGAGATGAGAAATCCCGTCATCAGTTACTGATGAATTTGGTTTGGATTTTTGCTTGCGTTTTTTTTACGTTTCATTACCAACATGTATTGGCGCTGAATTATTTCTACTAATTATCCAATATTATCAGGTCCTTAGAACTTATACGCGGCTGGTTCACTTCAGATACGTCTCAAGAGATTAGTAAAGGTTTGAACCTCCCTCGGGCCAAACGGCTCAAATTCATcctcaaaaaacaaatggaataGAACGTGGACTTGGTGTGgcattgcaatttctatttttatagaAGGATTTTCAAGGAACcgtcataaatttttggaCGTTTTTGTGCCTAATTGTAAGACAAAGggac

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D2N4	Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna PE=1 SV=2
O70585	Dystrobrevin beta OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=3
P84060	Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001875 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09068 all species →	EF-hand_2	EF hand	Domain	Interproscan
PF00569 all species →	ZZ	Zinc finger, ZZ type	Domain	Interproscan
PF09069 all species →	EF-hand_3	EF-hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050774 all species →	Family	KCMF1 and Dystrophin	Interproscan
IPR000433 all species →	Domain	Zinc finger, ZZ-type	Interproscan
IPR015153 all species →	Domain	EF-hand domain, type 1	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR015154 all species →	Domain	EF-hand domain, type 2	Interproscan
IPR043145 all species →	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12268 all species →	E3 UBIQUITIN-PROTEIN LIGASE KCMF1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0045202 all species →	Cellular Component	synapse	Interproscan
GO:0099536 all species →	Biological Process	synaptic signaling	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000019326.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.