Gene detail

Detailed information of ENSSJYP00000019468.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: CAE1138994.1, ERCC5 [Sepia pharaonis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P35689	DNA excision repair protein ERCC-5 OS=Mus musculus OX=10090 GN=Ercc5 PE=1 SV=4
P28715	DNA excision repair protein ERCC-5 OS=Homo sapiens OX=9606 GN=ERCC5 PE=1 SV=3
P14629	DNA excision repair protein ERCC-5 homolog OS=Xenopus laevis OX=8355 GN=ercc5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002893 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00752 all species →	XPG_N	XPG N-terminal domain	Family	Interproscan
PF00867 all species →	XPG_I	XPG I-region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006086 all species →	Domain	XPG-I domain	Interproscan
IPR029060 all species →	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR019974 all species →	Conserved_site	XPG conserved site	Interproscan
IPR006085 all species →	Domain	XPG, N-terminal	Interproscan
IPR036279 all species →	Homologous_superfamily	5'-3' exonuclease, C-terminal domain superfamily	Interproscan
IPR001044 all species →	Family	XPG/Rad2 endonuclease, eukaryotes	Interproscan
IPR006084 all species →	Family	XPG/Rad2 endonuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16171 all species →	DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0004520 all species →	Molecular Function	DNA endonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0004519 all species →	Molecular Function	endonuclease activity	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000019468.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.