Gene detail

Detailed information of ENSSJYP00000020161.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: KAI6241574.1, Integrin alpha-PS2 [Aphelenchoides fujianensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P26007	Integrin alpha-6 OS=Gallus gallus OX=9031 GN=ITGA6 PE=2 SV=1
P26008	Integrin alpha-V OS=Gallus gallus OX=9031 GN=ITGAV PE=2 SV=1
Q9QUM0	Integrin alpha-IIb OS=Mus musculus OX=10090 GN=Itga2b PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000604 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20806 all species →	Integrin_A_Ig_3	Integrin alpha Ig-like domain 3	Domain	Interproscan
PF01839 all species →	FG-GAP	FG-GAP repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR032695 all species →	Homologous_superfamily	Integrin domain superfamily	Interproscan
IPR048286 all species →	Domain	Integrin alpha, third immunoglobulin-like domain	Interproscan
IPR000413 all species →	Family	Integrin alpha chain	Interproscan
IPR013519 all species →	Repeat	Integrin alpha beta-propellor	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23220 all species →	INTEGRIN ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005178 all species →	Molecular Function	integrin binding	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan
GO:0007229 all species →	Biological Process	integrin-mediated signaling pathway	Interproscan
GO:0008305 all species →	Cellular Component	integrin complex	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0033627 all species →	Biological Process	cell adhesion mediated by integrin	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000020161.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.