Genomic Location: not available for this species
NR annotation: XP_002163195.1, 3'-5' ssDNA/RNA exonuclease TatD [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families
| CDS |
| ENSSJYT00000021353 |
| Transcript |
| ENSSJYT00000021353 |
| Protein |
| ENSSJYP00000020442.1 |
| UniProt accession | Description |
|---|---|
| Q9L6M2 | 3'-5' ssDNA/RNA exonuclease TatD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=tatD PE=3 SV=1 |
| B7LTZ5 | 3'-5' ssDNA/RNA exonuclease TatD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=tatD PE=3 SV=1 |
| Q0SZ31 | 3'-5' ssDNA/RNA exonuclease TatD OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=tatD PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005846 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01026 all species → | TatD_DNase | TatD related DNase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR050891 all species → | Family | TatD-type Metallo-dependent Hydrolase | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR018228 all species → | Conserved_site | Deoxyribonuclease, TatD-related, conserved site | Interproscan |
| IPR001130 all species → | Family | 3'-5' ssDNA/RNA exonuclease TatD-like | Interproscan |
| IPR032466 all species → | Homologous_superfamily | Metal-dependent hydrolase | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10060 all species → | TATD FAMILY DEOXYRIBONUCLEASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0008310 all species → | Molecular Function | single-stranded DNA 3'-5' DNA exonuclease activity | Interproscan |
| GO:0016788 all species → | Molecular Function | hydrolase activity, acting on ester bonds | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
ENSSJYP00000020442.1.
