Gene detail

Detailed information of ENSSJYP00000020478.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: ALG36746.1, lipopolysaccharide-induced tumor necrosis factor-alpha factor 2 [Brachionus koreanus]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0C0T0	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Rattus norvegicus OX=10116 GN=Litaf PE=2 SV=1
Q9JLJ0	Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog OS=Mus musculus OX=10090 GN=Litaf PE=1 SV=1
Q99732	Lipopolysaccharide-induced tumor necrosis factor-alpha factor OS=Homo sapiens OX=9606 GN=LITAF PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000706 (this species only)
Transcription factor family	zf-LITAF-like · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10601 all species →	zf-LITAF-like	LITAF-like zinc ribbon domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006629 all species →	Domain	LPS-induced tumour necrosis factor alpha factor	Interproscan
IPR037519 all species →	Family	LITAF domain containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23292 all species →	LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0098560 all species →	Cellular Component	cytoplasmic side of late endosome membrane	Interproscan
GO:0098574 all species →	Cellular Component	cytoplasmic side of lysosomal membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19363	LITAF; lipopolysaccharide-induced tumor necrosis factor-alpha factor	-	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.