Detailed information of ENSSJYP00000020816.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_048477187.1, probable E3 ubiquitin-protein ligase HERC1 [Rhincodon typus]
Species abbreviation CMOSA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15751Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002276 (this species only)
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415
all species →
RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00632
all species →
HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan
PF00622
all species →
SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408
all species →
RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091
all species →
Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR000569
all species →
DomainHECT domainInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051210
all species →
FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015940
all species →
DomainUbiquitin-associated domainInterproscan
IPR001870
all species →
DomainB30.2/SPRY domainInterproscan
IPR043136
all species →
Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR035983
all species →
Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR003877
all species →
DomainSPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870
all species →
REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10594HERC1; E3 ubiquitin-protein ligase HERC1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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