Gene detail

Detailed information of ENSSJYP00000021023.1 in Catostylus mosaicus

Genomic Location: chr17:382700...384660
NR annotation: XP_030629866.1, eukaryotic translation initiation factor 5A-1-like [Chanos chanos]
Species Catostylus mosaicus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P10160	Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus OX=9986 GN=EIF5A PE=1 SV=2
Q6NX89	Eukaryotic translation initiation factor 5A-1 OS=Danio rerio OX=7955 GN=eif5a PE=1 SV=1
Q6EWQ7	Eukaryotic translation initiation factor 5A-1 OS=Bos taurus OX=9913 GN=EIF5A PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008051 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21485 all species →	IF5A-like_N	Translation initiation factor 5A-like, N-terminal	Domain	Interproscan
PF01287 all species →	eIF-5a	Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR020189 all species →	Domain	Translation elongation factor, IF5A C-terminal	Interproscan
IPR014722 all species →	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR048670 all species →	Domain	Translation initiation factor 5A-like, N-terminal	Interproscan
IPR001884 all species →	Family	Translation elongation factor IF5A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11673 all species →	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045901 all species →	Biological Process	positive regulation of translational elongation	Interproscan
GO:0045905 all species →	Biological Process	positive regulation of translational termination	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000021023.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.