Gene detail

Detailed information of ENSSJYP00000021245.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: EDO38979.1, predicted protein [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3U827	E3 ubiquitin-protein ligase RNF180 OS=Mus musculus OX=10090 GN=Rnf180 PE=1 SV=2
Q5RAK3	E3 ubiquitin-protein ligase RNF180 OS=Pongo abelii OX=9601 GN=RNF180 PE=2 SV=1
Q86T96	E3 ubiquitin-protein ligase RNF180 OS=Homo sapiens OX=9606 GN=RNF180 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006840 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13445 all species →	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR027370 all species →	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR033263 all species →	Family	E3 ubiquitin-protein ligase RNF180	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46717 all species →	E3 UBIQUITIN-PROTEIN LIGASE RNF180	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0031227 all species →	Cellular Component	obsolete intrinsic component of endoplasmic reticulum membrane	Interproscan
GO:0031624 all species →	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0042415 all species →	Biological Process	norepinephrine metabolic process	Interproscan
GO:0042428 all species →	Biological Process	serotonin metabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000021245.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.