Genomic Location: not available for this species
NR annotation: XP_047138588.1, chromodomain-helicase-DNA-binding protein 4 isoform X4 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000022215 |
| Transcript |
| ENSSJYT00000022215 |
| Protein |
| ENSSJYP00000021271.1 |
| UniProt accession | Description |
|---|---|
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 |
| A2A8L1 | Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001712 (this species only) |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF00176 all species → | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| PF00385 all species → | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR000330 all species → | Domain | SNF2, N-terminal | Interproscan |
| IPR023780 all species → | Domain | Chromo domain | Interproscan |
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR000953 all species → | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR002464 all species → | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
| IPR016197 all species → | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR038718 all species → | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45623 all species → | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0140658 all species → | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
| GO:0000122 all species → | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0000785 all species → | Cellular Component | chromatin | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003682 all species → | Molecular Function | chromatin binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006338 all species → | Biological Process | chromatin remodeling | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0042393 all species → | Molecular Function | histone binding | Interproscan |
ENSSJYP00000021271.1.
