Gene detail

Detailed information of ENSSJYP00000021900.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_012558515.2, Werner syndrome ATP-dependent helicase homolog [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14493 all species →	HTH_40	Helix-turn-helix domain	Domain	Interproscan
PF00570 all species →	HRDC	HRDC domain	Domain	Interproscan
PF09382 all species →	RQC	RQC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002121 all species →	Domain	HRDC domain	Interproscan
IPR029491 all species →	Domain	Helicase Helix-turn-helix domain	Interproscan
IPR018982 all species →	Domain	RQC domain	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR044876 all species →	Homologous_superfamily	HRDC domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR010997 all species →	Homologous_superfamily	HRDC-like superfamily	Interproscan

PANTHER

No PANTHER signature was detected for ENSSJYP00000021900.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0044237 all species →	Biological Process	obsolete cellular metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000021900.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.