Gene detail

Detailed information of ENSSJYP00000021987.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: EDO36342.1, predicted protein, partial [Nematostella vectensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000022962

ATGTCTTTGGATGTACGTCTTAATCGAATGGCAAAAATTGAAGCCATGGATGGCAAATTTGGATTCAATCATCACAAAGAGAATGCGGAGAGGCTTGGTTGGCTTATCAACATGCATCCTAATGAAATTCAAGATGAAGATAAGAAGTTAATAAGTTGTGTTGATTATTATTTCATCCAGGATGATGGTGATAGGTTTAAGGTGTCCTTTCCATTTCGACCATACTTTTATGTGCTTGCAAAGAAGGACACTGAAAGAGAATTAGCAACCTACATGAATAGAAAATATTCTGGATTGATTGCTGCAATTGAAACTGTATCAAAAGAAGACTTAGATCTgGCAAATCACTTAACTGGGTTGAAAAGAAGTTacataaaaatttccttttttaatgtaAACGATTTAATCAAAGTTAAAAGGGATGTGATGAGCATGGTAAGAAAGAACAAGGATGCACAGAAATCGCAAGCAACTTATGCCATGTTTAAaggtgaagatgatgatgaaagtaaTTCTAAAAGATTGACAAATCAAATGGAGAACATCATTGATATCAGAGAGTATGATGTTCCATACCATGTAAGAGTCTCAatcgatttgaaaattaatgtagTAAGTATCAAACAATGGAATTATCATCACAACTTTGatgtaaaattcaaattattaatAAGAGATTTGTTGCCTGATTTTCAGGATCCTGTGGTCTGTGCATTTGATATAGAAACAACGAAATTACCATTAAAATTTCCAGATTCTGCAATTGATTCTATTATGATGATCTCTTACATGATTGACGGACAGGGTTATCTCATCACAAATAGAGAAATTGTTTCAGAAGATGTTGAGGATTTCGAATATACGCCAAGACCAGAATTTGAAGGACCAATTACAGTTTTTAATGAACCTGACGAGGAATCATTGCTAAGGAAGTTCTTCGACCACTTGGTTCAAGTAAAACCTAACATCTTGGTTACTTACAACGGTGACTTCTTCGATTGGCCTTTTGTCGAAGCAAGAGCAAAAGTCCATGGCCTGGACATGGACAAAGAAATAGGATTTTTACCCGATGCAATGGGAGAATACAAAGCAAGACATGCAATTCACATGGATGCTTTTCGATGGGTTAAAAGAGACAGTTACTTGCCAGTTGGAAGTCAAGGTCTTAAAGCAGTGACAAAAGCAAAACTACGATATGATCCTGTGCAATTGGATCCAGAAGACATGTGTAGAATGGCGAGTGAAGAACCAAGGgTGTTATCAAATTATTCAGTTTCTGATGCAGTTGCTACTTATTATCTCTACATGCAATATGTACATCcattcatttttgcattatgTACTATTATTCCTATGGAACCTGACGAGGTATTGAGAAAAGGTTCGGGTACACTTTGTGAAACTTTGCTTATGGTTCAAGCCTTCCATGCAAATATCATCTTTCCAAATAAACAAGAACAGGCCCTTAACAAATTCACAAGCGATGGACATTTACTTGAAAGCGAGACATACGTTGGTGGTCACGTGGAAGCATTGGAATCTGGTGTTTTTCGTAGCGATATTCCATGCAGATTTAGAATgGTTCCTGAAGGATTTCAGAAATTGATTGATGCTGTAGAGGCAACAATGCAAGACACGATAGAAAGAGAGGAGAATATACCGATTGATCAAGTGATAAACCTTGACGAGGTTTGTGCAGAATTGAAAGAGAAACTTGGTGCATTAAGAGACACTCCTTCTCGCATTGAAAATCCAATGATTTATCATTTAGATGTTGCTGCTATGTAtccaaatatcattttaaccAATCGACTACAGCCTCCAGCCATGGTTGATGACGTCATCTGTGCATCATGTGACTTCAATCGACCGGGTGCCAAATGTCAAAGGGCAATGGATTGGATGTGGAGGGGCGATTTTTctcCAGCTTCATATAATGAATACCAAAACATTAAACAACAATTAGAAGTAGAAACTGTTCCAGGAATGAATCCGGGTGATCCTCCAAGAccatttcattcattgccACCACAAGAACAAGCAAAAATGAGCAAGAAACGATTAGCAGATTATTGCCATAAGgcgtacaagaaaacgaaagtTGTAAGGGAAGAAAAACGTAAGACAATAATATGTCAAAGAGAGAATTCATTTTATGTGGATACAGTCAGAGCATTTAGAGACAGGAGATATGAGTTTAAAGGTTTACTAAAAGTTTGGAAGAAGAAACTTGGTGCTGCTGCAGACAAAGGAGATCCTGCTGAAATCAAATATGCCAAAGGAATGGAAGTTTTGTacgattcattgcaattggcCCATAAATGTATccttaattcattttatggATATGTTATGAGGAAAGGatCGAGATGGTTCTCAATGGAAATGGCTGGCATTGTTTGTTACACTGGTGCAAATATCATTACACGTGCAAGAGAAATTGTGGAACAAATCGGGAGGCCCTTAGAACTAGACACTGATGGAATTTGGTGCATCTTGCCTGCCAGCTTTCCTGAAAATTTTGTGATCAAAACgacaaatgcaaaaaagccAAAAGTTGTCATTTCTTACCCTGGTGCTATGCTAAATTACATGGTTAAGaaatatttcaCAAATGAGCAGTATCATGAATTAGTTGATCCTGAAAAGTCCAAATATCAAGTTCGAAGTgaaaactcaatttttttcGAGGTTGATGGGCCTTACAAAGCGATGATATTACCAGCTTCAAAAGAAGAAGgcaaaaaactcaagaaaagGTATGCTGTTTTCAATGAGGATGGAAGTCTTGCAGAATTGAAAGGTTTTGAAGTGAAGCGTCGTGGtgaattgcaattaatcaaaatattccaatcttcagtttttgaagcatttttaaatggaaataatttgcaaacagTTTATGAATCTGTTGCAAAAGTTGCTGATTATTGGCTTGATATTCTTTATTCAAAGGCGCAAAATCTTCCCGACACAGAACTATTTGAATTAATCTCAGAGAACCGCAGCATGTCCCGCGCACTTGAGGATTATGGTTCGCAAAAATCAACATCAATAAGCACAGCCAAGAGGCTTGCGGAATTCCTTGGTGATCAGATGGTAAAAGACAAAGGATTAAGTTGCAGATttgttatttcaaagaaacctGAAGGCTCACCAGTTACAGAACGTGCGATTCCATTGGCCATATTTCAAACTGAAGAAAGTATCAAGAAACattatttaaagaaatggTTGAAAAGTGTGACAGATTTTGAGATTCGATCCATCTTAGATTGGGATTATTACATTGAAAGATTGAATAGTTGCATACAGAAGATTATCACGATTCCAGCCGCATTGCAAGGTATATCAAATCCAGTTCCACGCTGTGCTCATCCTGATTGGctgcataaaaaattattagaaaaGAATGATGTACTTCGACAAcacaaaattgtagaaatgTTTGCACCCGCAAAGAAGCAACTGCCAGGAGTACCAATCGAGCAATGTGTAAATGACATTGAAGATTTTGGTTCAAATAAAAGACCTCGTACGTCACCAAATATtccaatttcaacaaaaagaagaaaaattgacGGAAAACGAAAACAAGAATTGGAGTTTAATGATGATGAGTTGTCCAAACATTGGAGAGATGTGCTCGGTGACCCCCCAGAAATGGGTTCAACTAAGGCGGCCATGCAAGAATGGGTGCAGTTCCAGAAAAAGAAATGGCGATTTCAATCACACCAAAGAAAAGCGAGACAAGAACTTGGAAAAGAGGCTGGTTACGTAGCAACAACTGGATCAAGGGGCTCCAATACCGGTTTGACAGGTTTTTTTAGAAGACAAGCCCAGTCAATATTGGAATCACCATGGCAGATAATTCAGATTACGGAGGGGGATACCCCGGGTGTTTTTCGATTATGGGCTATGATTGGTCAAGAGCTTCACTCAATTAAAGTCAATGTTCCAAGaatattttatgtaaattcaAGAAAACAGAAGGAAGGAGATGGTGCTACATGGAGACGTGTTTCAAGATCATTACCACGATCAAAtccttcttattttctttatgaATACACTGTTCCTGAGGTTGTTTTTAAAGAACATATGAGTGAACTTTCTGCGGATTTATCATCTCCTGATATCGAAGGAATCTACGAAACTCAGGTACATTCCCCTTCAAAGTACAaccatgttttttttcttttatgtaTTTGTTTAATCGAATTGGAAATCTATGACCTCGATCAATTGGACTTCAAAACATTAGCAGAAGTGGATTATTTGTCAAaagcaaatatgaaatatatttacatGTATCATTTTTTCGTTTTGAATACAGTCAGAAGCAATCAAATGCCAAATTTGCAGTCATTGTACCAACTTTATCGAGCAATCCAGCGTGCCCTTTCAGGATATAAAGATGAAAAGCGTGGCCCAACAATGCTTCTCATTCAATCTCATTTGGGTAacaaatatctttttttccatattttttttttacattttacattGCTTCACATAATTGACATGGGACAATTTACTGCATTAGACTGGCAAAGACAATCTGCTAAGAAATTTATCAAGGCATTCCTTGAAACGGAAAGATGGTTTCAGgTGCAATTGGAAAACGCTAGATATTTTCATATCCCAGTTGGAAATATACCAGCCTCAGATCCAACCCTTTTTGCTTCTGATGTTTTTTATGcaagaaatttacaaaaaaataatcaCCTTTTATGGATGACACCAACAGAAAGACCTGATCTTGgaggaaaagaagaagatgataacagGCTGGTGACAGAAGCTGATGAAGGTGGAAGTATGGAGTTGAATAATCCAGGATGTTATCCAACTATCTGCGTTGAAGTTTCTGTGGATGGTCTTgctgttaacactgttttgCAGtCCCATCACGTGCACGATGCCGAAGGTGGCGCAGGAACAGCAGTCAGTTTTGATTCGCTGCCACAAGCTTCGCTGGAAGAGTTGATGACATCAGGGCCCGGTGCTGCGTCAGCATTGACGAGTTATGATGAAGCTGCTTTGTGTTCAACTGCATTCAGAATATTGAAAGGATTGATCTACAGTTggttgcatgaagtttcatccAATCAGAATCCTTTTGCTGATAATCAACTGATTCATTTTTATCggtttgtattttttatgattttgttatttccttacttttttcttttccaacaGTTAATTGCAGAGTTTAAAAAACTTGGCTCAACAATTGTCTTCgcaaatttcaacaaaatcattCTTTGTACAAAGAAACGAAAcGTGAAGGATGCACTGGCTTatgttcaatttattttaagaaGCATTCAAACCAAAGATTTGTTTCATAGCATCGATTTATCACCTACGTCATGTTGGGTATATTTGTATTGGATGGATCAGGCAAATCATGGTGGAATCCGGGGGAAAATACCGAAGAAGTTTGTTGAAGACCCGGATGCATTTTGTGCTGATGATGCGGATTTATCTGAAGATGAATTGGATGAAAATGCTGATTCTGATGACGCTCAAGTTGAAATGAATTGGAATATCGTCCATTTTCTTCCAAAAGCTGCTTCATGTCAAGAGTTCTTCAAGGTTGTAATTGCTGGTCACATTCATGCAATTTATTCCCATCTCATGGAACAAAACGAAAtcagaaaatcaaatgaaacacCATTACGGCGATCTGGTACCCAGGCACAGaaaatggcTGAAACAACAGCAACACCATGGAGTGTTGAATTCGCACAGCGAAGAATTCGAGATGAACTTACAGAACAATTATTCagcattacacaaaaaattcatcgaaCTCTTAGTGGAGAAAGCGGAAAAGATCCGAGTTCAGATTTTCCGGTTTTGGCTGGATCGCATTTAATCTTAAAGCATCCTGCTTTGGAATTTGTAAAATATGTCTGTAAGGTGCTTTCGTTGGATATCAATGTTGAAAGCCAAGTTGCAAAATTGagGAGAGACCTTCTAAAACTCATAGGAATGGGAGAATTTTCAGAAGAAGCATATTTTAAAGATCCATGTTTATCTTTTATTGTTGCTGAGgTTATTTGCGAATATTGCAACAGTTGCCGAGATCTTGATTTATGCAGAGATCCTTTCATAACCCCACCAAAAGGAAACAATCCCGCAACTATCGAATGCCCAGATTGCCGTAATAAATATTCAATGCCTGTTATCGAAGAAGaattaatttcaatgcttTGCAGAAGATCAATGACGTATACATTGCAAGATTTGAAATGCATCAAGTGCAGAGAGGTAAAAGCGCGGAGCATGAACATATATTGTGAATGCGCAGGCGAGCtgacaacaCATAGCttcaaaaaaatacatttaacaTTTTGTATGCTTATGTTGATTGTAACCCAGTGGGATGATGCCATTTGA

Transcript

ENSSJYT00000022962

Protein

ENSSJYP00000021987.1

MSLDVRLNRMAKIEAMDGKFGFNHHKENAERLGWLINMHPNEIQDEDKKLISCVDYYFIQDDGDRFKVSFPFRPYFYVLAKKDTERELATYMNRKYSGLIAAIETVSKEDLDLANHLTGLKRSYIKISFFNVNDLIKVKRDVMSMVRKNKDAQKSQATYAMFKGEDDDESNSKRLTNQMENIIDIREYDVPYHVRVSIDLKINVVSIKQWNYHHNFDVKFKLLIRDLLPDFQDPVVCAFDIETTKLPLKFPDSAIDSIMMISYMIDGQGYLITNREIVSEDVEDFEYTPRPEFEGPITVFNEPDEESLLRKFFDHLVQVKPNILVTYNGDFFDWPFVEARAKVHGLDMDKEIGFLPDAMGEYKARHAIHMDAFRWVKRDSYLPVGSQGLKAVTKAKLRYDPVQLDPEDMCRMASEEPRVLSNYSVSDAVATYYLYMQYVHPFIFALCTIIPMEPDEVLRKGSGTLCETLLMVQAFHANIIFPNKQEQALNKFTSDGHLLESETYVGGHVEALESGVFRSDIPCRFRMVPEGFQKLIDAVEATMQDTIEREENIPIDQVINLDEVCAELKEKLGALRDTPSRIENPMIYHLDVAAMYPNIILTNRLQPPAMVDDVICASCDFNRPGAKCQRAMDWMWRGDFSPASYNEYQNIKQQLEVETVPGMNPGDPPRPFHSLPPQEQAKMSKKRLADYCHKAYKKTKVVREEKRKTIICQRENSFYVDTVRAFRDRRYEFKGLLKVWKKKLGAAADKGDPAEIKYAKGMEVLYDSLQLAHKCILNSFYGYVMRKGSRWFSMEMAGIVCYTGANIITRAREIVEQIGRPLELDTDGIWCILPASFPENFVIKTTNAKKPKVVISYPGAMLNYMVKKYFTNEQYHELVDPEKSKYQVRSENSIFFEVDGPYKAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLNGNNLQTVYESVAKVADYWLDILYSKAQNLPDTELFELISENRSMSRALEDYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCRFVISKKPEGSPVTERAIPLAIFQTEESIKKHYLKKWLKSVTDFEIRSILDWDYYIERLNSCIQKIITIPAALQGISNPVPRCAHPDWLHKKLLEKNDVLRQHKIVEMFAPAKKQLPGVPIEQCVNDIEDFGSNKRPRTSPNIPISTKRRKIDGKRKQELEFNDDELSKHWRDVLGDPPEMGSTKAAMQEWVQFQKKKWRFQSHQRKARQELGKEAGYVATTGSRGSNTGLTGFFRRQAQSILESPWQIIQITEGDTPGVFRLWAMIGQELHSIKVNVPRIFYVNSRKQKEGDGATWRRVSRSLPRSNPSYFLYEYTVPEVVFKEHMSELSADLSSPDIEGIYETQVHSPSKYNHVFFLLCICLIELEIYDLDQLDFKTLAEVDYLSKANMKYIYMYHFFVLNTVRSNQMPNLQSLYQLYRAIQRALSGYKDEKRGPTMLLIQSHLGNKYLFFHIFFLHFTLLHIIDMGQFTALDWQRQSAKKFIKAFLETERWFQVQLENARYFHIPVGNIPASDPTLFASDVFYARNLQKNNHLLWMTPTERPDLGGKEEDDNRLVTEADEGGSMELNNPGCYPTICVEVSVDGLAVNTVLQSHHVHDAEGGAGTAVSFDSLPQASLEELMTSGPGAASALTSYDEAALCSTAFRILKGLIYSWLHEVSSNQNPFADNQLIHFYRFVFFMILLFPYFFLFQQLIAEFKKLGSTIVFANFNKIILCTKKRNVKDALAYVQFILRSIQTKDLFHSIDLSPTSCWVYLYWMDQANHGGIRGKIPKKFVEDPDAFCADDADLSEDELDENADSDDAQVEMNWNIVHFLPKAASCQEFFKVVIAGHIHAIYSHLMEQNEIRKSNETPLRRSGTQAQKMAETTATPWSVEFAQRRIRDELTEQLFSITQKIHRTLSGESGKDPSSDFPVLAGSHLILKHPALEFVKYVCKVLSLDINVESQVAKLRRDLLKLIGMGEFSEEAYFKDPCLSFIVAEVICEYCNSCRDLDLCRDPFITPPKGNNPATIECPDCRNKYSMPVIEEELISMLCRRSMTYTLQDLKCIKCREVKARSMNIYCECAGELTTHSFKKIHLTFCMLMLIVTQWDDAI

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WVF7	DNA polymerase epsilon catalytic subunit A OS=Mus musculus OX=10090 GN=Pole PE=1 SV=3
Q07864	DNA polymerase epsilon catalytic subunit A OS=Homo sapiens OX=9606 GN=POLE PE=1 SV=5
Q9VCN1	DNA polymerase epsilon catalytic subunit 1 OS=Drosophila melanogaster OX=7227 GN=PolE1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002978 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08490 all species →	DUF1744	Domain of unknown function (DUF1744)	Domain	Interproscan
PF03104 all species →	DNA_pol_B_exo1	DNA polymerase family B, exonuclease domain	Family	Interproscan
PF00136 all species →	DNA_pol_B	DNA polymerase family B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023211 all species →	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR006172 all species →	Family	DNA-directed DNA polymerase, family B	Interproscan
IPR013697 all species →	Domain	DNA polymerase epsilon, catalytic subunit A, C-terminal	Interproscan
IPR006133 all species →	Domain	DNA-directed DNA polymerase, family B, exonuclease domain	Interproscan
IPR042087 all species →	Homologous_superfamily	DNA polymerase family B, thumb domain	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR006134 all species →	Domain	DNA-directed DNA polymerase, family B, multifunctional domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR029703 all species →	Family	DNA polymerase epsilon catalytic subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10670 all species →	DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0006272 all species →	Biological Process	leading strand elongation	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006287 all species →	Biological Process	base-excision repair, gap-filling	Interproscan
GO:0006297 all species →	Biological Process	nucleotide-excision repair, DNA gap filling	Interproscan
GO:0008310 all species →	Molecular Function	single-stranded DNA 3'-5' DNA exonuclease activity	Interproscan
GO:0008622 all species →	Cellular Component	epsilon DNA polymerase complex	Interproscan
GO:0045004 all species →	Biological Process	DNA replication proofreading	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02324	POLE; DNA polymerase epsilon subunit 1	EC:2.7.7.7	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.