Genomic Location: chr12:4290856...4292966
NR annotation: XP_012566941.2, homeobox protein mab-5-like [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000023001 |
| Transcript |
| ENSSJYT00000023001 |
| Protein |
| ENSSJYP00000022023.1 |
| UniProt accession | Description |
|---|---|
| P09070 | Homeobox protein Hox-B4 OS=Xenopus laevis OX=8355 GN=hoxb4 PE=2 SV=1 |
| P15856 | Homeobox protein abdominal-A homolog (Fragment) OS=Apis mellifera OX=7460 GN=ABD-A PE=3 SV=1 |
| P81192 | Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000051 (this species only) · gene tree & orthology |
| Transcription factor family | Homeobox · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR020479 all species → | Domain | Homeobox domain, metazoa | Interproscan |
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR017970 all species → | Conserved_site | Homeobox, conserved site | Interproscan |
| IPR050296 all species → | Family | Antennapedia-type homeobox | Interproscan |
| IPR000047 all species → | Conserved_site | Helix-turn-helix motif | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45659 all species → | HOMEOBOX PROTEIN HOX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0000122 all species → | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0009952 all species → | Biological Process | anterior/posterior pattern specification | Interproscan |
ENSSJYP00000022023.1.
