Gene detail

Detailed information of ENSSJYP00000022350.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_002155894.2, testican-2 isoform X1 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000023346

GAAAAACGGAAATGGCAATAGGCCGTGACCACAGTCAGTCGTTTCCTTTGTTCAtcggaaaaaacatttctcgaTGAGGAGGTCGAGCACAAGCAATTTTCAAGAATCAAAATGGCTGTGAAACTACCCGTAGCATTGCTCATAGTGGCATTCCTAGCAGCAAATGATGTAGCTGGTCAACAGGAGAAAAAGCAAGCTTCCCTTGGGTGCTTGGAATTCCCATGTGCTGGCAAATATGAAACATGTGAAGTTATTACTGGTACCCCAATATGTGTGAAGAAATGCCCTAACTGCAAGGTAGGAGAGACAGTCAAAGCAGTTTGTGGATCTGATGGAAAGTCCTATGCTAGCAAATGCCATCTGCAGCAAGCAGAATGcttgcaaaatgttttgattgaGCCAATGTGTAATGGAAAATGCCCTTGTGACCCTAAAGAACTGGAAGACTTAGACCCAGTAACTGTGCATAAACTGCAAAAACTGAGACTCAAGATTCATTTGAGTCGTAGATTCAACAAGGAAATGAAGGAGGAGACTGCTGCTGAAGAGGCATTTAAACTGCTCAAAGAATCCAAGAAACAGAAACCAGTTGTGCTTGCTGTCACAACTGCAGaggaaattgataaaatatactccaagaaaatgaagaaatggatGAAGAGCAAGGTGGTAaacaaatttaagaaaatgaaacaagaagaAGCCACAATGCAACAAACAAAGACTAAGCTTGATACAAACATCTGCTCAAGAAGTGAACTGGCTGATTTACCTGGAaggttaattgattggttcCATGTCCTAAAGTCAAATGCAGCACAGTCACCTGACAGTCAAGGAAAAAAAGTGTCAATGAAGGAGATGTCTTTTCTTGACGCAAAATTGAAGGCCATGTATGTGACGCTAGCTTGCAAGCAAGACCCAGACCGACCTGACTCTGAAGTTTACTGCTTGCAGCCTGTTCAATGGATGTTTAATTACCTTGATGTAAACAATGATGGAGTGTTGCAGGATACAGAATTAGctgatattgaaaatgttaaatcTGAGCACTGTATGAAGAGGTTTTTCCTGGAATGTGACAGAAATCAAAATGGAACAGTGGAAAAAACAGAATTTTGTAGATGTCTTTGCATTGAACCGCCATGCACCAAAGCCATCGAGAACATTCCCACATTGCTAATCTCTGGTGTTCCACGTCCTGTACCAGGCCTGTTTGTTCCTAAATGTAACGAAGATGGATTTTATGTTTCCAAACAATGTACTAGCAAGGAGTGCTTCTGCGTTGACAGAAATGGTATGGAGGTACCAGAGACAAGAGTTACGGGAAAGGATTTGGAATGTTTTGAAAATACACGTCCAGCCGCGCCAGCTGAGAAAGAAGAACCTTTTACGAGGGATCCTGTGCCATAAAAGGCTTTGCAGACGTTCTCAGcatcttatttttgttttctagtagtatttcatatttatagcCCAAGTTTGTTAAGCCCATTAATGTAAAACTTTGTTAGAATTAGTCTTTTGTGgtattttaccattttttgatattgttgTAGTTAAAGTATTTGGTACTTGAGAAAAAAGAAGGACAATCTTTTGTACGACTAGTCTGATAGGCTTTTTATGAACCTCATGTCACTATTTTGTCATAGGTTTTTGCTCTGGTCTCTGTTGATTCAAAACTAAAGCGCCCTTAGTGACTTGCTCTATTTATTGAGATGCTTGTGCCTTTTGCGTGCAGCagatttttcatatttttatatgacAGACTAGCAATAGAATAATGTCCTCTATGGTTGTCACATAATgcgataaaaaatttcattccaaGAGTTCCTAAgaataatgaatgaaagacTATTAGAGAGGTATTGAATTTTACTAAGGGAAGTGTTGTACCAACCCGTGACGAATAATTGCACCATGCGACAAGAGGAGACAACCTAACTGGTTACCTTCGTCAATTCccctttatttctttagttACTAGGATTTGTTTCCCTTGTTACTTTGATGACCATTGCAGTTATAACTGTTACGTATCATATGTTAAGTGCTGCTTGCGCCAGCTTTTATCTTAAACTTACATTAAGGCATTTATAGAAAACTTTGTAGAACAGTTTGTTTGTAAATTGGCCGTTTTTTGTTGAACGAATTAACTCTGTATTCGCAGTGCATTTCCGTTTGTCACCGATCGGTTCATGGCCAAATTTGCGCCATTAATTCAAaaagttttagagaaaaaagaaTGTACGGCAGATAATCATGGTAGATATGATTTGGATATTCAAACAGGGCCAAGTTTCTTAATATTAATTTCGTTTCTATAGTGCCCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ER58	Testican-2 OS=Mus musculus OX=10090 GN=Spock2 PE=1 SV=1
Q92563	Testican-2 OS=Homo sapiens OX=9606 GN=SPOCK2 PE=1 SV=1
P24054	SPARC-like protein 1 OS=Rattus norvegicus OX=10116 GN=Sparcl1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007471 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00086 all species →	Thyroglobulin_1	Thyroglobulin type-1 repeat	Domain	Interproscan
PF10591 all species →	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000716 all species →	Domain	Thyroglobulin type-1	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR019577 all species →	Domain	SPARC/Testican, calcium-binding domain	Interproscan
IPR036857 all species →	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13866 all species →	SPARC OSTEONECTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005518 all species →	Molecular Function	collagen binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan
GO:0050840 all species →	Molecular Function	extracellular matrix binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000022350.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.