Gene detail

Detailed information of ENSSJYP00000022583.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: CAH3035859.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSSJYT00000023582

atgttaGAGAAAAACAATGCAGCTACACCGTATTCATTTACGGTTCCCTTGACAACAGATGAAAATAACCGATCTGAGGCTGGTGATGTTTCATGGTTAGAAGAGTCAAAAGAATCAGCCTCGTTATCAGCAAGtttatcaaaaagatcACTTTATGATGTTGAGCAAAAGACGTTTGCAAATCGGAGAATGGACAACCAAAAAGTAGTCACCTTTTTCAGGGAATCAGACAGCGAACAGCCAGAGTTAAGAATAATCATTGATGCAAGAAAATACACGAATGTTGAAATGTTGATTGATGAACTTAGTAGAATtctcaatttaaaagaccatgaaagaaatatttataacCAATCAGGAAGAATTCTGCGAAGAATTGAAGATTTTGTAGATGGTGGATCGtactttttcagtttttcaatcAACGATAAAAGATTTATGCAAGCTTTATCTATTGTCAACAGTGAACCGCAGAATCcgaaagaaaaagcaaagaataaCTGGAAGAAAGTGTTGAACCGCAAAAAGAGAAGGATAAGTGttataacaaatgaaaatagttCAAATCCATGGAAAGTATTAATTGATGAAACAAAACTACAAAGTTTTTCACAATTGCTTcatgaattaaatttgattatcCAGCCGAAAAATGGAAGAGTTTTTCGATTGTGTACAAACAAAGGAAGGCGGGTTCGAAGTCTTGGTGAACTTTTTGTTGGAACTGAAACATTTGTCGCTATCGTAAGTTCCATTGGAATGACAGAAAATGATGGAGTGAATGGCAGTTTAAGGAAAGCAACACATGTCAGCCCAAGAAAGCAAAGAATCCATAAGCCATCAAAATATGACGTCATAACAGGTGAAGGAAGTCATCTGGAAAGAAGGCTGATAAGCATAAAAGGAAAAAGTCATGTTTTTCATCCACCCTCCCATGTGACTAATGAACAATTGAAATTACAAACAACGAAACCACCAGAGCAAAAGTTACAATTGGATTGGATATATGGATATAACGGACAGGAATCACgtgataatatatttattttacaatCAGAAGAGCTcatatattacattgcatctgTTGTTGTTATTTACGATGTTTACAGACACAATCAAAGATATTATGCTGAGCATACAATGAAAATCACGTGTATGGCTTTGCATCCAAACAATTGGTACGTTGCGACGGGACAAAGTGCACCAGAAAATTACAATGTTGAAGTCGTGGATCATATCAGGATTTGGAATGCAGAAATGCTAAACACTTTGGCTATTTTAACACTCGAAGAGCAAACTTTATCTGTCATTCGATTAACTTTCTCGTTGGAGGATTGTGGTCGAAAAATTGCAAGCATTGACACTGATGGACATAATTTTAGATTGCTAGTTTGGGAATGGAATTCAAAAGAGATCGTTGCACAAAGCCAGagctacgaagaagaagaaatggcTATCAAGTTTCATCCacattcaaataaaagtttattaaGCGTTGGAAaaaatcatatattttattggaatTGGAGAGGAAACCATCTTGAAAAGTACAAGGGACATTTCTTTgaTTGTGATATTCCTAGTTacataaattgtttggtttatACATCAAGTGGCGAAGCCATTGCAGGTGATTCGAATGGCAaccttcatttttggcaagaaGgaAGCAGAAAGATAAAAAGGGTTATTAAAAATGCACACGCGGGAAGTATTGAGGCAATTTTCCTTTTGTCACATGATGTTATGATTACATATGGGACCAATGACAGCCTTTTGTCTCTCTGGGAAACAAGAGACATGGGACGAAATCCCACAGCAACAATAAAGatTACAGGTGATCATGGTGTTGTCACTTCGATTGCTGTGTCACCAAATCACCATGACTACAGCATTGGTGACACCGAATTATTTCTTGGAACCAGCAAGAATCAAATACTTCATGGGACATTCAAAACGCAATTTAAGCCTTTGATTAAGAGTCATGAAAAGGAGACTACATGTGTGGTTGCAAACCCTTGTTATAATCATATATTGAGTGTTGGCTTGGATGGTTACGTCATTTATCGATCAATTGAAGACAACTCAATAATTTGGGAGAAGAAAATTGAGTTTGCAGCAACATCAGCAGCTTTCTATCCTTATGGAAATGTTGTTGCAGTTGGGATGGATTCAGGAAGGTGGTGTGTATTGAGTTCTAAAGATGGAAATCACATTGCCTCGTTTCAAAGCGGAAAAGATCCTTTGACATCTATTGCATATTCGTTAGAGGGTGGAGATGTTGCCATAGGAACAGCCAATGGtgaagtttatttattttctgtttacgACGAAGGACACAGTTACCGATTGGTTGCAAGCGTTGAATGCAACTCAGAGAAGATTATGGCAATTGATTGGTCGAAAGATGGAACCTACCTTAGAACCATGACAAATGAATGGGATCAGAATATATTGAACACTGAACAACTTTCAGAAGTTGGCGATTTGAAGTTGATTGCAGATTTGCAATGGCAGACACAAAAGTCGACCCTAAGCTATGCCAGTTCAGGAATTTGGAAGCCAGCTTCTGATTTGCGATTTTTATCAGCTGACTGTTGCTTGCCACGTGATTTGCTTTGTGTTGGAACAGAATATGGTCACGTGAGATTGTATAATTATCCATGTTGGAACAAACAAGCAAACTATAGAGAATACTCCTTACACGTTGGGAATGTAAATCAAGTCTGTTTTTTACCAACGGAGATTCACGTGATCAGCTCAGGGCAATTTGATAATGCTGTAATGCAGTGGAAGATtgtttttggcaaaacaaATTTGACAGGATTGAAAACGGGTTTTATGAGAGAACATACAATTGAAGAACAGCCTGATGGGTGGTTGACAAGAGAACGATCATCAAGTATGGGTCATCGTAAGATGAGAAGAGCCGATTCAAGAATACGCGCATCAAATGATAACGACCCATTTGCACGACCAACTTCAATTGCGTTGAAGAGCACAGGAGTAGAAAATGCTCCAGATGATCATCGTGCTAAAGATAAGAAAATGAGCCCAAAAGAGATACAAGATTATCTTTACAGAAGTGGTACTGGTCTCATGCAGAGAGATGTTGCTGCAAAAAAGTCACATGAT

Transcript

ENSSJYT00000023582

AATAGTTTAATTTggcaattcaaaattcaaaaatgttaGAGAAAAACAATGCAGCTACACCGTATTCATTTACGGTTCCCTTGACAACAGATGAAAATAACCGATCTGAGGCTGGTGATGTTTCATGGTTAGAAGAGTCAAAAGAATCAGCCTCGTTATCAGCAAGtttatcaaaaagatcACTTTATGATGTTGAGCAAAAGACGTTTGCAAATCGGAGAATGGACAACCAAAAAGTAGTCACCTTTTTCAGGGAATCAGACAGCGAACAGCCAGAGTTAAGAATAATCATTGATGCAAGAAAATACACGAATGTTGAAATGTTGATTGATGAACTTAGTAGAATtctcaatttaaaagaccatgaaagaaatatttataacCAATCAGGAAGAATTCTGCGAAGAATTGAAGATTTTGTAGATGGTGGATCGtactttttcagtttttcaatcAACGATAAAAGATTTATGCAAGCTTTATCTATTGTCAACAGTGAACCGCAGAATCcgaaagaaaaagcaaagaataaCTGGAAGAAAGTGTTGAACCGCAAAAAGAGAAGGATAAGTGttataacaaatgaaaatagttCAAATCCATGGAAAGTATTAATTGATGAAACAAAACTACAAAGTTTTTCACAATTGCTTcatgaattaaatttgattatcCAGCCGAAAAATGGAAGAGTTTTTCGATTGTGTACAAACAAAGGAAGGCGGGTTCGAAGTCTTGGTGAACTTTTTGTTGGAACTGAAACATTTGTCGCTATCGTAAGTTCCATTGGAATGACAGAAAATGATGGAGTGAATGGCAGTTTAAGGAAAGCAACACATGTCAGCCCAAGAAAGCAAAGAATCCATAAGCCATCAAAATATGACGTCATAACAGGTGAAGGAAGTCATCTGGAAAGAAGGCTGATAAGCATAAAAGGAAAAAGTCATGTTTTTCATCCACCCTCCCATGTGACTAATGAACAATTGAAATTACAAACAACGAAACCACCAGAGCAAAAGTTACAATTGGATTGGATATATGGATATAACGGACAGGAATCACgtgataatatatttattttacaatCAGAAGAGCTcatatattacattgcatctgTTGTTGTTATTTACGATGTTTACAGACACAATCAAAGATATTATGCTGAGCATACAATGAAAATCACGTGTATGGCTTTGCATCCAAACAATTGGTACGTTGCGACGGGACAAAGTGCACCAGAAAATTACAATGTTGAAGTCGTGGATCATATCAGGATTTGGAATGCAGAAATGCTAAACACTTTGGCTATTTTAACACTCGAAGAGCAAACTTTATCTGTCATTCGATTAACTTTCTCGTTGGAGGATTGTGGTCGAAAAATTGCAAGCATTGACACTGATGGACATAATTTTAGATTGCTAGTTTGGGAATGGAATTCAAAAGAGATCGTTGCACAAAGCCAGagctacgaagaagaagaaatggcTATCAAGTTTCATCCacattcaaataaaagtttattaaGCGTTGGAAaaaatcatatattttattggaatTGGAGAGGAAACCATCTTGAAAAGTACAAGGGACATTTCTTTgaTTGTGATATTCCTAGTTacataaattgtttggtttatACATCAAGTGGCGAAGCCATTGCAGGTGATTCGAATGGCAaccttcatttttggcaagaaGgaAGCAGAAAGATAAAAAGGGTTATTAAAAATGCACACGCGGGAAGTATTGAGGCAATTTTCCTTTTGTCACATGATGTTATGATTACATATGGGACCAATGACAGCCTTTTGTCTCTCTGGGAAACAAGAGACATGGGACGAAATCCCACAGCAACAATAAAGatTACAGGTGATCATGGTGTTGTCACTTCGATTGCTGTGTCACCAAATCACCATGACTACAGCATTGGTGACACCGAATTATTTCTTGGAACCAGCAAGAATCAAATACTTCATGGGACATTCAAAACGCAATTTAAGCCTTTGATTAAGAGTCATGAAAAGGAGACTACATGTGTGGTTGCAAACCCTTGTTATAATCATATATTGAGTGTTGGCTTGGATGGTTACGTCATTTATCGATCAATTGAAGACAACTCAATAATTTGGGAGAAGAAAATTGAGTTTGCAGCAACATCAGCAGCTTTCTATCCTTATGGAAATGTTGTTGCAGTTGGGATGGATTCAGGAAGGTGGTGTGTATTGAGTTCTAAAGATGGAAATCACATTGCCTCGTTTCAAAGCGGAAAAGATCCTTTGACATCTATTGCATATTCGTTAGAGGGTGGAGATGTTGCCATAGGAACAGCCAATGGtgaagtttatttattttctgtttacgACGAAGGACACAGTTACCGATTGGTTGCAAGCGTTGAATGCAACTCAGAGAAGATTATGGCAATTGATTGGTCGAAAGATGGAACCTACCTTAGAACCATGACAAATGAATGGGATCAGAATATATTGAACACTGAACAACTTTCAGAAGTTGGCGATTTGAAGTTGATTGCAGATTTGCAATGGCAGACACAAAAGTCGACCCTAAGCTATGCCAGTTCAGGAATTTGGAAGCCAGCTTCTGATTTGCGATTTTTATCAGCTGACTGTTGCTTGCCACGTGATTTGCTTTGTGTTGGAACAGAATATGGTCACGTGAGATTGTATAATTATCCATGTTGGAACAAACAAGCAAACTATAGAGAATACTCCTTACACGTTGGGAATGTAAATCAAGTCTGTTTTTTACCAACGGAGATTCACGTGATCAGCTCAGGGCAATTTGATAATGCTGTAATGCAGTGGAAGATtgtttttggcaaaacaaATTTGACAGGATTGAAAACGGGTTTTATGAGAGAACATACAATTGAAGAACAGCCTGATGGGTGGTTGACAAGAGAACGATCATCAAGTATGGGTCATCGTAAGATGAGAAGAGCCGATTCAAGAATACGCGCATCAAATGATAACGACCCATTTGCACGACCAACTTCAATTGCGTTGAAGAGCACAGGAGTAGAAAATGCTCCAGATGATCATCGTGCTAAAGATAAGAAAATGAGCCCAAAAGAGATACAAGATTATCTTTACAGAAGTGGTACTGGTCTCATGCAGAGAGATGTTGCTGCAAAAAAGTCACATGAT

Protein

Uniprot

Gene family

Uniprot term	Description
Q26613	77 kDa echinoderm microtubule-associated protein OS=Strongylocentrotus purpuratus OX=7668 GN=EMAP PE=2 SV=1
Q9Y1C1	77 kDa echinoderm microtubule-associated protein (Fragment) OS=Lytechinus variegatus OX=7654 GN=EMAP PE=2 SV=1
Q05BC3	Echinoderm microtubule-associated protein-like 1 OS=Mus musculus OX=10090 GN=Eml1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03607	DCX	Doublecortin	Family	Interproscan
PF03451	HELP	HELP motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003533	Domain	Doublecortin domain	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR050630	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR005108	Conserved_site	HELP motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13720	WD-40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0072686	Cellular Component	mitotic spindle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18595	EML1_2; echinoderm microtubule-associated protein-like 1/2	-	Cytoskeleton proteins	ko04812	deepkoala