Gene detail

Detailed information of ENSSJYP00000022947.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_030217831.1, chordin-like protein 2 [Gadus morhua]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000023968

TTGTTACATGTTTTCAAGGAGGGTAGAAGGACATATCTTGAACACAGAGCGACAGCATTCAACTACATTGCATCGATATAGGATGAGatattcaaGCATCAGAATTATATCCATTGTTTGCtttatccttttttgtttcttgtttggACTTCAAACagTTCAATCCTATTGCATGCAAAATGGCAAATCATATTCGATTGGAGATGTTTGGAGTGTAAACAGCCGAAGACAATGCAGGAAATGTAAATGCTTACAGGGTCGGCACATCCGTTGCCTGCCAAATTGTAACCGAAATCTACGATTTCCATTGCGACCACTTTTACCGCATGATTTATCAAAATCCACGATTCAGCCGGCTCCTACTGGCACGCATTGCATTTTGGAAGGTAAACGACACAATAAGGGAGAGAGTTGGACTGAAAATAGTCAGCACTCAAGAAACCTAGATCGAAACCAATGCATGGAGTGCAACTGCAAGGCCCAAGTGACCATCTGTGCAATCCGAAGATGTCCTGTTCTTGATTGTCATAACCCTGTCACTCAGCCTGGCACATGCTGCAAAACATGCCAAGAGCGACCAGCAAGACCTCCAAGAGAATCTTCAAAGagagGTTGCTTGAGCATTGGAGGACATTTTCAGGACGAAGAGGTTTGGCAGCTGTATCTTCCATCGCCAGATGTTGTTGCAACATGTGTCGATTGCAATTGCaagAATGCAAGAGACCGTTGTAGCATACATCCATGCCCCATTACAAGATGCTTGGAACCTGTTAAAAGACCCGGAGATTGTTGTGCACTTTGTCCAGGGCAAAGGCcatcatcaaagaaaaacaaagaaaattacGGCACAAAATCTTCAGTTGGTAGCGGAATACTTGggtttttattgaaatcaagcaatcaaccaGATGAAAAgggtttgaaaattgaaaaagaatcaaattcaACTGTCGACTGGGCTGCGGAAACTACAAAATCACCAAATGGTTTAGTACCCAACaagaaaaaagAAATTGGATGTCGTTTTGGTGCAAACCTCTACTATAGACATAAAGAAATCTTTTATCCGGttctaaacaaaaaagttcaaatttgTACTAAATGTGTTTGCATGAACACAATCGTTAATTGCGCAAGGATAAGATGCCCAACTAGATACCCATGCAGAAGACCATTTCGAAAGGATGgattttgttgcaaagtttGCGAAGCTATGAGCGACAGAGAAGCGAGGAATCTTGAAGCAATACAAATGTATCAGAATATGGGTTGCAGCAGAGCGAAACGAAACCAGTTGCAAGTTTATCGATACAATGAATTACATGCTAGTGCCACACAATTGTCAGCCAGATACTTATTTGATAAATCACATCAACCCAATAATAAACGATCAGAAATTCACCATTTGCAGTTCGTCAACTTGAAAGTCAACGTGACAAAAACATATCTTGAGAACGATGATGTAACTCGAAATTcacttgataaaaattggaaTTATCTTGGAGCAATcaaagaaaAAATGTTTTCACGATTCAAACGTCTTGAAGATGATTTACTCAAATGCAGAGATGCAAGAAGATGCATAAAAAAGCTGACAAATTTGATCGATCATTTGAAGACGAAAGCAGCTCGAAGGAAAAGATGCGAAACAAGTCAACCTGTACGAGCATTTGGACGTCTTCAAAAGTGAAACCAGACATTTCTCAGTCAATAAAGACTTTAAATTGGTTGTATGATGTTTTGtgtatttatttagttttcttGGCAAAATAGTTAGTATTTATTCTATAAGGTGTTTTAAATCACCATAATCTCTTTTTAATTCCTTTTAGAGCATTCTATATAAGGTACAAAATAGACTTTTATAGTAAAGTGCGGCCTCGATCTGAAACTATTGCGGCCTCTCAATTGACGTTTTGGGTTTGCATACTCGTTTGATATCAGCCTCCTACTTCATTTATTAAAATTCCATGAAACTGGAATTATAATTATAGATCCACTTGCCGTTGCTACCTACTTTAGCAAGGTTTAGATTAGCTGACGCTGCCATCACCTTTTTAAGTTGGATTTAGAAGGCCTAGTCCGTGGAGCAAatacaaataattttcttttcgtCATGTCTGCCACACAATCTAGGAAAGGGTATTTCATTCTCATTTAAATTGAAGAATAAATGTTAGATGTGATGTTGCGTACATTCCCATGGTTGGTTGGTACCTTGATTTGTTTCAGTCTTTGGTAACATAGATTCCCCAGCTTACTGAATGTTGCAAGGCAGACGGTTTTTATCTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NZV1	Cysteine-rich motor neuron 1 protein OS=Homo sapiens OX=9606 GN=CRIM1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004753 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093 all species →	VWC	von Willebrand factor type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007 all species →	Domain	VWFC domain	Interproscan
IPR045717 all species →	Family	Chordin-like protein 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46303 all species →	VWFC DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0030514 all species →	Biological Process	negative regulation of BMP signaling pathway	Interproscan
GO:0036122 all species →	Molecular Function	BMP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24520	CHRDL1; chordin-like protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.