Gene detail

Detailed information of ENSSJYP00000022947.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_030217831.1, chordin-like protein 2 [Gadus morhua]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSJYT00000023968

TTGTTACATGTTTTCAAGGAGGGTAGAAGGACATATCTTGAACACAGAGCGACAGCATTCAACTACATTGCATCGATATAGGATGAGatattcaaGCATCAGAATTATATCCATTGTTTGCtttatccttttttgtttcttgtttggACTTCAAACagTTCAATCCTATTGCATGCAAAATGGCAAATCATATTCGATTGGAGATGTTTGGAGTGTAAACAGCCGAAGACAATGCAGGAAATGTAAATGCTTACAGGGTCGGCACATCCGTTGCCTGCCAAATTGTAACCGAAATCTACGATTTCCATTGCGACCACTTTTACCGCATGATTTATCAAAATCCACGATTCAGCCGGCTCCTACTGGCACGCATTGCATTTTGGAAGGTAAACGACACAATAAGGGAGAGAGTTGGACTGAAAATAGTCAGCACTCAAGAAACCTAGATCGAAACCAATGCATGGAGTGCAACTGCAAGGCCCAAGTGACCATCTGTGCAATCCGAAGATGTCCTGTTCTTGATTGTCATAACCCTGTCACTCAGCCTGGCACATGCTGCAAAACATGCCAAGAGCGACCAGCAAGACCTCCAAGAGAATCTTCAAAGagagGTTGCTTGAGCATTGGAGGACATTTTCAGGACGAAGAGGTTTGGCAGCTGTATCTTCCATCGCCAGATGTTGTTGCAACATGTGTCGATTGCAATTGCaagAATGCAAGAGACCGTTGTAGCATACATCCATGCCCCATTACAAGATGCTTGGAACCTGTTAAAAGACCCGGAGATTGTTGTGCACTTTGTCCAGGGCAAAGGCcatcatcaaagaaaaacaaagaaaattacGGCACAAAATCTTCAGTTGGTAGCGGAATACTTGggtttttattgaaatcaagcaatcaaccaGATGAAAAgggtttgaaaattgaaaaagaatcaaattcaACTGTCGACTGGGCTGCGGAAACTACAAAATCACCAAATGGTTTAGTACCCAACaagaaaaaagAAATTGGATGTCGTTTTGGTGCAAACCTCTACTATAGACATAAAGAAATCTTTTATCCGGttctaaacaaaaaagttcaaatttgTACTAAATGTGTTTGCATGAACACAATCGTTAATTGCGCAAGGATAAGATGCCCAACTAGATACCCATGCAGAAGACCATTTCGAAAGGATGgattttgttgcaaagtttGCGAAGCTATGAGCGACAGAGAAGCGAGGAATCTTGAAGCAATACAAATGTATCAGAATATGGGTTGCAGCAGAGCGAAACGAAACCAGTTGCAAGTTTATCGATACAATGAATTACATGCTAGTGCCACACAATTGTCAGCCAGATACTTATTTGATAAATCACATCAACCCAATAATAAACGATCAGAAATTCACCATTTGCAGTTCGTCAACTTGAAAGTCAACGTGACAAAAACATATCTTGAGAACGATGATGTAACTCGAAATTcacttgataaaaattggaaTTATCTTGGAGCAATcaaagaaaAAATGTTTTCACGATTCAAACGTCTTGAAGATGATTTACTCAAATGCAGAGATGCAAGAAGATGCATAAAAAAGCTGACAAATTTGATCGATCATTTGAAGACGAAAGCAGCTCGAAGGAAAAGATGCGAAACAAGTCAACCTGTACGAGCATTTGGACGTCTTCAAAAGTGAAACCAGACATTTCTCAGTCAATAAAGACTTTAAATTGGTTGTATGATGTTTTGtgtatttatttagttttcttGGCAAAATAGTTAGTATTTATTCTATAAGGTGTTTTAAATCACCATAATCTCTTTTTAATTCCTTTTAGAGCATTCTATATAAGGTACAAAATAGACTTTTATAGTAAAGTGCGGCCTCGATCTGAAACTATTGCGGCCTCTCAATTGACGTTTTGGGTTTGCATACTCGTTTGATATCAGCCTCCTACTTCATTTATTAAAATTCCATGAAACTGGAATTATAATTATAGATCCACTTGCCGTTGCTACCTACTTTAGCAAGGTTTAGATTAGCTGACGCTGCCATCACCTTTTTAAGTTGGATTTAGAAGGCCTAGTCCGTGGAGCAAatacaaataattttcttttcgtCATGTCTGCCACACAATCTAGGAAAGGGTATTTCATTCTCATTTAAATTGAAGAATAAATGTTAGATGTGATGTTGCGTACATTCCCATGGTTGGTTGGTACCTTGATTTGTTTCAGTCTTTGGTAACATAGATTCCCCAGCTTACTGAATGTTGCAAGGCAGACGGTTTTTATCTC

Protein

Uniprot

Uniprot term	Description
Q9NZV1	Cysteine-rich motor neuron 1 protein OS=Homo sapiens OX=9606 GN=CRIM1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093	VWC	von Willebrand factor type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR045717	Family	Chordin-like protein 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46303	VWFC DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030514	Biological Process	negative regulation of BMP signaling pathway	Interproscan
GO:0036122	Molecular Function	BMP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24520	CHRDL1; chordin-like protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala