Gene detail

Detailed information of ENSSJYP00000022949.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_051737077.1, LOW QUALITY PROTEIN: uncharacterized protein fbxo44.9 [Ctenopharyngodon idella]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000023971

atgtctggatattttcaaagaagtcCGACATCTGGACATCCTTACCAACAGAATCCTAATCAGTCACATCCatatcaacaacaacagcaacaactttACCAATCGCACCCCTACCCTTATACCTCAACCCCCCAATACCCCTACCAACCACAAAACCAACAGAGCCCTTATAACCAGCCCCAGCATGCACCTGGTTATGCATCCCAGTATTATTATGGACAAGCCCCATATGATCCCAATGTTTATCCAAGTGCCCCTGTTCGGCACCCTGTTAATCCCTCAATTCCATTCCAATACCCTCCCCCTCCCCACCATTTAGTTGGTCCACCTCAAGAGATGCCACCATCTTATAAAGAATCAgttaacttgatagaaaatccaaattttgaagcaatatGTTGGAGCAAAAATGGCGACTCCAATGATATCAGCACAGCACCATGGGAAGTCAAAACTGGTGGAGAAGGATGGAGGCTAGAAAAAACACCTCAGGgTAGCAAAATATCCAATTGTCCCACTGAAGCAGGTCCCTATGCACATTGTGTGGTTGGTTCTAATGATTGGTGCAAAAGGTCACAAATAATTGACTTGGAAGAGAACGGATTTTCATCATTGTTCATGGATCAACAGAAACCTTGTATTCAAGTCTGTGAATGGTTTATTTCCCGCTCTGATTGTAGTGGGGAATATTTCATGAAGGTGAAActtcttgataaaaacaagaaaccaGTTGATCACTTTAATTCAGGGAAATGTTCCCCTGGCTCTAAGGAATGGCAAAAAGTTGAGCATAAATTCTACAACTATCCTCCTGGCGTTCGTTATATTAAATTCAAGGATGGCACCaaagatacaaaattttgGGCAGGACATTATGGTGCAAAAATGTGCCAGCCTACGTTTTTGATCCATTCTGCCTCAAAATATAGTGGACCAAGACCCATTGCAAATCAATACCCTGGAACTCATTTTCCTGGAAATCAATACCCTGGAACCCATTTTCCTGGAAATCAATACCCTGGAACTCATTTTCCTGGAAATCAATACCCTGGAACACAATTTCCTGGAAATCAATACCCTGGAACACAATTTCCTGGAAATCGATACCAAGGATCTCAGCTTCCTGGAACTAAGACAACTGGATCTAAACATGACAATCAAACTGTAAATTTAGTAAAGAACCCAAGTTTCACACCATCAAATTGGCAGGGAGATGTTTGTCAAGAGATCGATTTTCAACCATGGAGCATAATGACTAATAAAGATGGATATTGCCTTGAAAAGAAACCTTTAGGTGCTAAAAACGGGAAATACCCCGTGGAATTAGATGGATTTGATGTATGGTGCATCGCAACTTCCAATTCATTCAGCGAAAGATGTCAGACCATTGATTTAATTAAGCAAGGAATCACATCTGTTGTTCTTGATACAGAGCGACCTCCTATCAAAATCCGTGAATGGTTCACATCACGAATGGACTGCGAGGGAAAATATTTCCTCAAAGTCTCTTTACTAGATCAACAAAAAAGACCAATTCCTGGGTTTGTTTACGACACGGGTATAAAAGAAGCTCCTTCTGGAATTTGGTTGAAAGAAGAGCATGTTTTTATGAATATTCCTGCTGGTGTACgatttattgaatttaaagATGGCGGTGCAGATTGCAAATGTTGGGCAGGGTTTTATGGATGCAAAATGGTCGGAGCATTTGCTGGTGTAATCACAAATAatgcTACATATCAAGGCCCAGTCCCACCGGTCCAATCAACTAGCAGGGCCAATCAAAGAAACCTGCTCGAAAACGCTTGTTTAAAACCAAACCATCCTTGGAATGGAAATGAGACTGATGATATCAATTTTACTCCATGGGAAATCAAGGAAAACACTGGAGACGGAatcaaattggaaaaaaaaccaaatgGCACTGCTGCTGGAGAATTCCTTCGTGAGATGGGTGGAGAGCCTCATTGCATTGCAACATCGTTTGGTTGGTTTAGGAGAATCCAGACAATCGATTTGTTGAGAAATGGAGTCATTCCTCACATGTTTAATAATCCAGATCTTAAGATTTACGTCTGTGAATGGTTTGCATCTCGTACTGATAACGAGGGTGAGTATTACCTACAAGTTTCATTGCTAGACGAGAAAGAACAAGAAATTCCCGGCCATAGATTTGACAGTGGTGTCAACAAAGCATTGCCTGATGAATGGGAAAAAGTTGAATATACTTTTTTCCCTGTGCCAGACACAGCACGTTACGTAAGATTTGAGGATGGTGGCAAAGACACAAAATATTGGGCAGGGCAATATGGCGTCAAGATGGCTGGAGCCGCTGTTTATGCTGGACAAAAACATGAGTGTCAAGGAGAAGAATGCAATATTATGTAA

Transcript

ENSSJYT00000023971

ACCAATGGTACCGTCGTCAAAAGTAGGACTCAAAAAGTACGCCAAGTTTCACCTGAACACCCGCTAAAGATCTCTGTTGGGAAGGCCTTGGAATGCAATCGGGCCACTTGTCAAACTCgtttctgttattttgttggtaaaataaaatttgatttttcatccACTTCCAGGCTGTCTATTGAATCAAACTGAATCTAATTCAATGTTTGGAATAAAGTCAATCTGAactaaatatcattaaaaatgtctggatattttcaaagaagtcCGACATCTGGACATCCTTACCAACAGAATCCTAATCAGTCACATCCatatcaacaacaacagcaacaactttACCAATCGCACCCCTACCCTTATACCTCAACCCCCCAATACCCCTACCAACCACAAAACCAACAGAGCCCTTATAACCAGCCCCAGCATGCACCTGGTTATGCATCCCAGTATTATTATGGACAAGCCCCATATGATCCCAATGTTTATCCAAGTGCCCCTGTTCGGCACCCTGTTAATCCCTCAATTCCATTCCAATACCCTCCCCCTCCCCACCATTTAGTTGGTCCACCTCAAGAGATGCCACCATCTTATAAAGAATCAgttaacttgatagaaaatccaaattttgaagcaatatGTTGGAGCAAAAATGGCGACTCCAATGATATCAGCACAGCACCATGGGAAGTCAAAACTGGTGGAGAAGGATGGAGGCTAGAAAAAACACCTCAGGgTAGCAAAATATCCAATTGTCCCACTGAAGCAGGTCCCTATGCACATTGTGTGGTTGGTTCTAATGATTGGTGCAAAAGGTCACAAATAATTGACTTGGAAGAGAACGGATTTTCATCATTGTTCATGGATCAACAGAAACCTTGTATTCAAGTCTGTGAATGGTTTATTTCCCGCTCTGATTGTAGTGGGGAATATTTCATGAAGGTGAAActtcttgataaaaacaagaaaccaGTTGATCACTTTAATTCAGGGAAATGTTCCCCTGGCTCTAAGGAATGGCAAAAAGTTGAGCATAAATTCTACAACTATCCTCCTGGCGTTCGTTATATTAAATTCAAGGATGGCACCaaagatacaaaattttgGGCAGGACATTATGGTGCAAAAATGTGCCAGCCTACGTTTTTGATCCATTCTGCCTCAAAATATAGTGGACCAAGACCCATTGCAAATCAATACCCTGGAACTCATTTTCCTGGAAATCAATACCCTGGAACCCATTTTCCTGGAAATCAATACCCTGGAACTCATTTTCCTGGAAATCAATACCCTGGAACACAATTTCCTGGAAATCAATACCCTGGAACACAATTTCCTGGAAATCGATACCAAGGATCTCAGCTTCCTGGAACTAAGACAACTGGATCTAAACATGACAATCAAACTGTAAATTTAGTAAAGAACCCAAGTTTCACACCATCAAATTGGCAGGGAGATGTTTGTCAAGAGATCGATTTTCAACCATGGAGCATAATGACTAATAAAGATGGATATTGCCTTGAAAAGAAACCTTTAGGTGCTAAAAACGGGAAATACCCCGTGGAATTAGATGGATTTGATGTATGGTGCATCGCAACTTCCAATTCATTCAGCGAAAGATGTCAGACCATTGATTTAATTAAGCAAGGAATCACATCTGTTGTTCTTGATACAGAGCGACCTCCTATCAAAATCCGTGAATGGTTCACATCACGAATGGACTGCGAGGGAAAATATTTCCTCAAAGTCTCTTTACTAGATCAACAAAAAAGACCAATTCCTGGGTTTGTTTACGACACGGGTATAAAAGAAGCTCCTTCTGGAATTTGGTTGAAAGAAGAGCATGTTTTTATGAATATTCCTGCTGGTGTACgatttattgaatttaaagATGGCGGTGCAGATTGCAAATGTTGGGCAGGGTTTTATGGATGCAAAATGGTCGGAGCATTTGCTGGTGTAATCACAAATAatgcTACATATCAAGGCCCAGTCCCACCGGTCCAATCAACTAGCAGGGCCAATCAAAGAAACCTGCTCGAAAACGCTTGTTTAAAACCAAACCATCCTTGGAATGGAAATGAGACTGATGATATCAATTTTACTCCATGGGAAATCAAGGAAAACACTGGAGACGGAatcaaattggaaaaaaaaccaaatgGCACTGCTGCTGGAGAATTCCTTCGTGAGATGGGTGGAGAGCCTCATTGCATTGCAACATCGTTTGGTTGGTTTAGGAGAATCCAGACAATCGATTTGTTGAGAAATGGAGTCATTCCTCACATGTTTAATAATCCAGATCTTAAGATTTACGTCTGTGAATGGTTTGCATCTCGTACTGATAACGAGGGTGAGTATTACCTACAAGTTTCATTGCTAGACGAGAAAGAACAAGAAATTCCCGGCCATAGATTTGACAGTGGTGTCAACAAAGCATTGCCTGATGAATGGGAAAAAGTTGAATATACTTTTTTCCCTGTGCCAGACACAGCACGTTACGTAAGATTTGAGGATGGTGGCAAAGACACAAAATATTGGGCAGGGCAATATGGCGTCAAGATGGCTGGAGCCGCTGTTTATGCTGGACAAAAACATGAGTGTCAAGGAGAAGAATGCAATATTATGTAATTAATGTTACAACGATGTTGcaattatatttaaaatttgcaaggaTTTGTAATTGAACGCTGACAAGTAGACGACATTAATAAGTGCAAAACAGTAATTAAACTGCACCATTTCGAGACATTGTAGACATGAGTAGATTTTTGAAACCTCAGTGTATTTATAATTGTTGCTAAAATTTATGCGATTTTGATAAACACGAATATTTATATCACAATCCACATGCTCTCCATCTCATCTCCCCCTCCTTCGTACGACTTTTTTCTACTTCTCCttcctttcttgttttttatactTAGTTTTCTTCCGTGTGATCTTCTCCTTCACCTACTTATCTTTCCACTTCTTTTattccttcttctttttccgGTCTCCTTTTCTGCTCCTCTTCCTACTTCTACGTCttcttctttattcttttgctttctttgctGTTGCTCTACTTTTTCTTCTGCCTCTGCATCTCCCTTTTCCt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9N0C8	F-box only protein 27 OS=Macaca fascicularis OX=9541 GN=FBXO27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012480 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04300 all species →	FBA	F-box associated region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007397 all species →	Domain	F-box associated (FBA) domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR039752 all species →	Family	F-box only protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12125 all species →	F-BOX ONLY PROTEIN 6-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006516 all species →	Biological Process	glycoprotein catabolic process	Interproscan
GO:0019005 all species →	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031146 all species →	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000022949.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.