Gene detail

Detailed information of ENSSJYP00000023910.1 in Catostylus mosaicus

Genomic Location: chr3:10950570...10951826
NR annotation: MCP2520640.1, translation initiation factor IF-3 [SCandidatus Aminicenantes bacterium Aminicenantia_JdfR_composite]
Species Catostylus mosaicus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8R9C2	Translation initiation factor IF-3 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=infC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009378 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05198 all species →	IF3_N	Translation initiation factor IF-3, N-terminal domain	Domain	Interproscan
PF00707 all species →	IF3_C	Translation initiation factor IF-3, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036787 all species →	Homologous_superfamily	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	Interproscan
IPR036788 all species →	Homologous_superfamily	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	Interproscan
IPR001288 all species →	Family	Translation initiation factor 3	Interproscan
IPR019814 all species →	Domain	Translation initiation factor 3, N-terminal	Interproscan
IPR019815 all species →	Domain	Translation initiation factor 3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10938 all species →	TRANSLATION INITIATION FACTOR IF-3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0032790 all species →	Biological Process	ribosome disassembly	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0070124 all species →	Biological Process	mitochondrial translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000023910.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.