Gene detail

Detailed information of ENSSJYP00000024383.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: KAI1902955.1, hypothetical protein AGOR_G00021900 [Albula goreensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000025503

tgcatttttcttcaattttcacTGAAAATGACTTTTCTGGATTATCAAGCACTGTTAAAATCATTGTTCAACTCAACAGCCATTGAAGTAAAAGCTGTTCAAGTCACTAGATATCAATATGTAGGCCATTATGAGCTCCACCAGTCCTTGCATACAATGCAAACTCAGATAGGGGCTGGAATGACCCTCCAACTCTGGCCTTTGCCTCTACACAGAGTGTCTCAGCTCCTAGAAAAAGACTCGATTTGAGGAAAAGAGTTGCACATGATTGTATCAGTGGATCTGCTTTGAGCACAGGAATGACAAATTTATCACTCAATGCAAACAACCCACCTGCACATATACATGGACAGCAAAATACCTACCATCATAACCAAGATCCTGTCAAAATGGGTGCACCACCAATGAATGGAACTTTTGTACAACCTGCCACCAATGCACCTTTGATTCAGCCTCCTTTTTCAGGGTCCCAGAGTTACTATGCTCCTGGACGTCTGTCTACACCAGGCTATGGGGGTCACCAGCCAGCACCACTCCCAGGCTCAATGACCCCACCAGTTGGCCCAGTCCATAATTATCATCCACATCATTTGCCTCATGCTTCAAGCATGCCAAATCTACAGCAACATTTTCAAGGCGATGCAAATGGTGCCATGCCGAATCCTCAAGGTTCTCCTGCTCCACTGTTCAATGTAAATGCCCCATTTCAGACTGTTGCAACTGTTGGAGAACCTTCCAAAGCCTCTTCCACAAGTAGTTCTCATTTTGGTAGACCATTATTTGATATGAATTCCCAGAGCAATCCTATTGATGGTACAAGCAAACCATTAGGGTCTATAAGCAACCCTCCTGCAGCTGTGGTTGGTTCAGATCATGCATTGATGAACAAGACAATGCCAGCTTTGTCAACAACAGATGACATAGATGCATCACATCATGTACGTAGCAACTCAATGCCAGACTTCAAACCATTACTAGATGGGTCAAGTATGCCAGGTACTCTTGCAGCTCCACCAACGGATGGGTATTACACAAGATCGTTATCCCCTAACCCACCAATACAGAGAACTCCATCACCTACTCAAAGAGAGGGAGCTATAACAAATAATACTACTTATAAAGCAATTACTGACTCTGGTGTTTACCACAATGTAATGGatcaattaaattttgctCTTGATAAATGCTCAACTAAACTTGACACAAAACTTTATGatgatataaaaagaaaactcGACATCCTAGAACATCAGTGGAATAGTGAGAATCTGTTAAAAGAAGTTAAAGACAGAATGGTGAAACTGGCTGAAGcaatgacaaacagtaattttcaagAAGCTGATAGGATTCACCAGTCTCTCATTGTCGACTACTCAAGTGAGGTTAGTCAGTGGATGATTGGCATTAAGAAATTGATTGCTGCCTCCCAAACATAGTAaatcaaaaactgaaaattctatccaatttatatataaatataaaaattagttATACATAGTAAACATTAAATGGTAAGAAccaatttgattttttcagtttcattattttaatgtgattctTATGAGAGAATATATAGTTTGGCACATCATCCCCAAACTAGTGAAGAGATTGAATGATTATCAATAAGTTataatttgatcatttttgtacTGATGACAATTTCTGTATGCTTATCTCATATCAGTTGGCAAATTGAATTAGACTAAAAAGTCCAGGGTACATagacataattttttttatgttgaagGCATTGTATATCTAGCACATATAAAAACTCCCATCAGATGTCAGCTATGATTCAATGCCCCATTTCTGAAAATCTGCTTCTTTTGTTCCAGTTATTCCCATTGTCTCACCACTTTTGTAAAAACCTGTTGaaagaatttgcaagtttcatAGCTCTGATTTATCCATGGTGTTTAAGAAAGTGGTGAGAtcacaaacaaaaattatcttGTCCAAGAACAGAAACGTGCCAATTTCTTTAGTAACCTAGAGTTCATTTATCActgaaaaagaagaggaaTAGACGGTTTCAGCTTTGATAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HD15	Steroid receptor RNA activator 1 OS=Homo sapiens OX=9606 GN=SRA1 PE=1 SV=2
Q80VJ2	Steroid receptor RNA activator 1 OS=Mus musculus OX=10090 GN=Sra1 PE=1 SV=4
Q6QGW5	Steroid receptor RNA activator 1 OS=Rattus norvegicus OX=10116 GN=Sra1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005886 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07304 all species →	SRA1	Steroid receptor RNA activator (SRA1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040243 all species →	Family	Steroid receptor RNA activator 1	Interproscan
IPR009917 all species →	Domain	SRA1/Sec31	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18834 all species →	STEROID RECEPTOR RNA ACTIVATOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030374 all species →	Molecular Function	nuclear receptor coactivator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000024383.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.