Gene detail

Detailed information of ENSSYXP00000000888.1 in Micromussa lordhowensis

Genomic Location: :...
NR annotation: XP_020628029.1, balbiani ring protein 3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSYXT00000000963

TATTTTCGATCATGGCTTAATTAAGGATGAttcacaagaaaaaaaaggagaagcAGCAGCCCGTTGTATCGCGTGGAGGACGGCGTCTTTATCTGGGTAGCAAAACAGGAACTTTAAAATCGTGTCACGCGGTGTTAGTTACACGGCAATTCCCTGTGAGTCAATATTCGGTTTGTGACGTAATGGCTTGGTAATAACATTATATTAACCCGCAACGCGATCCTGAATCGCTAAAACAAGATAACATTAGGTGTTTGGAACAGTTCAGTACGGATAAGTGTCCTGAGAGGAGCAGAAAGATGATGAAAGCACTGCTGTTCATTCTGTGCCTAACTATGGGCGTAAACAACGCCATGCGGCTGAAAACAAAAGTTATACCATTGGAACTTCGACGTGTAATGGCTaacgtgacgtcactggactcATTTCTTCGAGTAATTTCCGTTGCAGGGATGACTCGTCATCCGGAAGCTTTCACAGATCTAAAGAAACGCGGAAAAGGCCAAGAAAGCCGCTGCCCAGAAGTACATCCAGCTCCAGAATGCCCGTCAGAAGTAAAAGATCTCTGCACGAACGACTCTTCTTGTCCACGTGGTTTATGCTGTAGCACTGGTTGTATCAAAGAATGTGTTTCTGGGAACAAGCGAAACGGTGGTCTTTTGGCGAGGGTCATCGAGAATTCAAAATTCCCTGATCTCCCGTATGTTATCCTGGAAAGCGCTCCGTGCGCTCCACATCCTACCGTGGTGGAAGTCCCCCAGCCTGAGGATTCGAGCTCTTTTTATTTTCCGTTCTTTGTGACATTATACCGGTGCGGTGGCGCTTGCAATGAGAGACCCTTTGAAACATCCTGTCAACCTGAAGGGAAAGAAGATCTAAACCTTGTGGTGAGCAAAGTTGCTTGGTCGTCCGCCGAAGCCGAGCTGCAAGAAATTTCAACCGAGTTCACAGCGGTCCGAGTAACGAACCACACTATCTGTTCTTGCGGGTGCAAGGTCAAGCCTACAGATTGTGATAACAGGACACAGCAGTACTCTAAAGAACGCTGTAGCTGCCAGTGCAAACCGCGATCTATACCCTGCCCGCTTAACTTCCGTTGGGATCCTGTCAAGTGTCAGTGTAGATGCGATCCTACAAAGATCGAGTCGAAGTGTACAAAGCGTTTCCAATTTGACGAGGAGACGTGTCGATGCACGTGTAGCAAGAGACCTTGTAAACAATCTCTGAAGGTACGTGATCAGAGGACCTGCATGTGCAAATGTCCGAGTATGCGGTGTCCCAGCGGAATGACATTAGATCGCCGGACGTGCACCTGTCTTGGGAACGTTAGAAGAATAAACGAGAAGCGTCGATAAAAGGAAAACGAAGTGGATGACTGATCTGTTCTTCAAACATACAAGTGATAGTATTTGGATGGTATAGATGGAGGAAAACGCAAGATAGGGAACGGAGAATTAGGGGAGTTTCCTCTCTCCCTCCCGTCAATTCCTCCACTGTCACTTTTCCACTCTGCTAGTCCCTTACTCTTCTGTATTAGTTACGATAGAAAAGAACTTAAGACGAAATCCAATagaaatcgagcaatttcagtttttaatggGGAAACAAACTGGTATACCAGAAtgatcagtttcatttcaccagtactttcaagtgtttcatttGAACTTCAAGATATATTTTCGGAACATTATCGCACCATTACCCAGTGTAAAAAAGGAATTAAAACAAGATCAATCTGGTAAGTATGGTGTGCGAAAATGTATGTCTTATTGTAAAATATAAACTaccgtaaactgccgcttataaGCTCTGGGCTTATACAACTTTTTAAGCGCTTTTCGATGTACTTATAAACGGAGAGACTTATATCCGAGGGGGCTTAAGaccggaataaaaaaaaataaaaacctgtTGAAACGAGCTGTAGCTGTGTTGATCGAAATACGttattttgtctccactccacaacagaaacaacacacgcaaagctgaaccaaataagtttattttggaaggGCCTGGCAAGAACCAACCCAAACAGTATATCTATAACTACTTAGAAACTACATAACAACTCCTTCATAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00341	PDGF	PDGF/VEGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000072	Domain	PDGF/VEGF domain	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR029034	Homologous_superfamily	Cystine-knot cytokine	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11633	PLATELET-DERIVED GROWTH FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008083	Molecular Function	growth factor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0008284	Biological Process	positive regulation of cell population proliferation	Interproscan
GO:0031954	Biological Process	positive regulation of protein autophosphorylation	Interproscan
GO:0070851	Molecular Function	growth factor receptor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05449	VEGFC_D; vascular endothelial growth factor C/D	-	Cytokines and neuropeptides	ko04052	deepkoala